RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 RASGRP4Q8TDF6 673 aa12.02□□□□□ -0.48
SFXN3-204ENST00000466982 LRRC45Q96CN5 670 aa12.02□□□□□ -0.48
SFXN3-204ENST00000466982 SELENOSQ9BQE4 189 aa12.02□□□□□ -0.48
SFXN3-204ENST00000466982 RNF14Q9UBS8 474 aa12.02□□□□□ -0.48
SFXN3-204ENST00000466982 TRIM33Q9UPN9 1127 aa12.02□□□□□ -0.48
SFXN3-204ENST00000466982 CD2APQ9Y5K6 639 aa12.02□□□□□ -0.48
SFXN3-204ENST00000466982 GMEB1Q9Y692 573 aa12.02□□□□□ -0.48
SFXN3-204ENST00000466982 LRRD1A4D1F6 860 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 IGF2BP3O00425 579 aaKnown RBP eCLIP12.02□□□□□ -0.49
SFXN3-204ENST00000466982 HGSO14964 777 aaPredicted RBP12.02□□□□□ -0.49
SFXN3-204ENST00000466982 CEP104O60308 925 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 PENKP01210 267 aaPredicted RBP12.02□□□□□ -0.49
SFXN3-204ENST00000466982 KRT16P08779 473 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 ITGA4P13612 1032 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 NQO1P15559 274 aaKnown RBP12.02□□□□□ -0.49
SFXN3-204ENST00000466982 TNNC1P63316 161 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 DHX9Q08211 1270 aaKnown RBP12.02□□□□□ -0.49
SFXN3-204ENST00000466982 ALX1Q15699 326 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 ANKRD20A2Q5SQ80 823 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 ANKRD20A1Q5TYW2 823 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 ANKRD20A3Q5VUR7 823 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 TOM1L2Q6ZVM7 507 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 LCORLQ8N3X6 602 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 TEX9Q8N6V9 391 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 MIGA1Q8NAN2 632 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 MAIP1Q8WWC4 291 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 CELF4Q9BZC1 486 aaKnown RBP12.02□□□□□ -0.49
SFXN3-204ENST00000466982 TRIM31Q9BZY9 425 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 DPH5Q9H2P9 285 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 SEMA6BQ9H3T3 888 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 GPCPD1Q9NPB8 672 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 ATXN10Q9UBB4 475 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 AMACRQ9UHK6 382 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 TMEM59LQ9UK28 342 aa12.02□□□□□ -0.49
SFXN3-204ENST00000466982 MINDY4BA8MYZ0 360 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 TLR2O60603 784 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 RARAP10276 462 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 PHKG2P15735 406 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 IFNAR2P48551 515 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 NCALDP61601 193 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 MXRA7P84157 204 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 PUS10Q3MIT2 529 aaKnown RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 VWA3BQ502W6 1294 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 PIGWQ7Z7B1 504 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 SLF2Q8IX21 1173 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 RNF10Q8N5U6 811 aaKnown RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 C4orf32Q8N8J7 132 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 ANKS4BQ8N8V4 417 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 NEK9Q8TD19 979 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 DHTKD1Q96HY7 919 aaPredicted RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 TMEM60Q9H2L4 133 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 TLDC2A0PJX2 215 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 GRID2IPA4D2P6 1211 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 PRPF3O43395 683 aaKnown RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 HARSP12081 509 aaKnown RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 TUBP50607 506 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 NLRP5P59047 1200 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 SEC23AQ15436 765 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 TMC3Q7Z5M5 1100 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 GBP7Q8N8V2 638 aaPredicted RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 TSKSQ9UJT2 592 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 IQSEC3Q9UPP2 1182 aaPredicted RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 MYH2Q9UKX2 1941 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 ATRNO75882 1429 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 VIMP08670 466 aaKnown RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 ALADP13716 330 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 CA8P35219 290 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 NAB2Q15742 525 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 UBAP2Q5T6F2 1119 aaKnown RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 LDHAL6AQ6ZMR3 332 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 CACNA2D4Q7Z3S7 1137 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 ENAHQ8N8S7 591 aaPredicted RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 TTLL11Q8NHH1 800 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 SNRNP27Q8WVK2 155 aaKnown RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 ATXN2LQ8WWM7 1075 aaKnown RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 OPTNQ96CV9 577 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 PRMT1Q99873 361 aaKnown RBP12.01□□□□□ -0.49
SFXN3-204ENST00000466982 ADAM7Q9H2U9 754 aa12.01□□□□□ -0.49
SFXN3-204ENST00000466982 CHD4Q14839 1912 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 GSTA1P08263 222 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 YY1P25490 414 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 CHRNA2Q15822 529 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 ECT2Q9H8V3 914 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 KBTBD4Q9NVX7 518 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 SWAP70Q9UH65 585 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 A0A087X0T9 212 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 SPDYE5A6NIY4 337 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 TTI1O43156 1089 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 FAM228BP0C875 321 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 LONP1P36776 959 aaKnown RBP12□□□□□ -0.49
SFXN3-204ENST00000466982 PSMC4P43686 418 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 IFI35P80217 286 aaPredicted RBP12□□□□□ -0.49
SFXN3-204ENST00000466982 IFIT5Q13325 482 aaKnown RBP12□□□□□ -0.49
SFXN3-204ENST00000466982 CUL1Q13616 776 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 PDXDC1Q6P996 788 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 SRBD1Q8N5C6 995 aaKnown RBP12□□□□□ -0.49
SFXN3-204ENST00000466982 TLCD1Q96CP7 247 aa12□□□□□ -0.49
SFXN3-204ENST00000466982 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms