RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CDY2AQ9Y6F7 541 aa24.69■■□□□ 1.54
LIME1-203ENST00000465591 TRANK1O15050 2925 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.68■■□□□ 1.54
LIME1-203ENST00000465591 CDKL5O76039 1030 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 SLC26A2P50443 739 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 LPIN1Q14693 890 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 ANKRD1Q15327 319 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 FAM160B1Q5W0V3 765 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 PDXDC2PQ6P474 469 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 ATP8B4Q8TF62 1192 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 ZBED2Q9BTP6 218 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 PHF20Q9BVI0 1012 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 IFIH1Q9BYX4 1025 aaKnown RBP24.68■■□□□ 1.54
LIME1-203ENST00000465591 PCDHA2Q9Y5H9 948 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 CUL9Q8IWT3 2517 aa24.68■■□□□ 1.54
LIME1-203ENST00000465591 COL4A4P53420 1690 aaPredicted RBP24.67■■□□□ 1.54
LIME1-203ENST00000465591 ZBTB42B2RXF5 422 aa24.67■■□□□ 1.54
LIME1-203ENST00000465591 FDPSP14324 419 aaKnown RBP24.67■■□□□ 1.54
LIME1-203ENST00000465591 IGFBP4P22692 258 aa24.67■■□□□ 1.54
LIME1-203ENST00000465591 NEK4P51957 841 aa24.67■■□□□ 1.54
LIME1-203ENST00000465591 MRPS6P82932 125 aaKnown RBP24.67■■□□□ 1.54
LIME1-203ENST00000465591 MTHFD1LQ6UB35 978 aa24.67■■□□□ 1.54
LIME1-203ENST00000465591 MYOCDQ8IZQ8 938 aa24.67■■□□□ 1.54
LIME1-203ENST00000465591 SLC5A5Q92911 643 aa24.67■■□□□ 1.54
LIME1-203ENST00000465591 MAFBQ9Y5Q3 323 aaPredicted RBP24.67■■□□□ 1.54
LIME1-203ENST00000465591 HBP1O60381 514 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 KRT76Q01546 638 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 TMEM62Q0P6H9 643 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 ST3GAL1Q11201 340 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 FBXO47Q5MNV8 452 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 GALNT17Q6IS24 598 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 RSPH3Q86UC2 560 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 FAM177A1Q8N128 213 aaPredicted RBP24.66■■□□□ 1.54
LIME1-203ENST00000465591 OXER1Q8TDS5 423 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 PPM1EQ8WY54 764 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 ARNTL2Q8WYA1 636 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 GTF3C6Q969F1 213 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 RAD9AQ99638 391 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 PRDM6Q9NQX0 595 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 ORC3Q9UBD5 711 aaPredicted RBP24.66■■□□□ 1.54
LIME1-203ENST00000465591 PCDHA10Q9Y5I2 948 aa24.66■■□□□ 1.54
LIME1-203ENST00000465591 CYP3A7-CYP3A51PA0A087WV96 503 aa24.65■■□□□ 1.54
LIME1-203ENST00000465591 AMHP03971 560 aa24.65■■□□□ 1.54
LIME1-203ENST00000465591 CYP3A7P24462 503 aa24.65■■□□□ 1.54
LIME1-203ENST00000465591 KLRC1P26715 233 aa24.65■■□□□ 1.54
LIME1-203ENST00000465591 INF2Q27J81 1249 aa24.65■■□□□ 1.54
LIME1-203ENST00000465591 C8orf34Q49A92 452 aa24.65■■□□□ 1.54
LIME1-203ENST00000465591 Q4G0T1 1027 aa24.65■■□□□ 1.54
LIME1-203ENST00000465591 SMAP1Q8IYB5 467 aaPredicted RBP24.65■■□□□ 1.54
LIME1-203ENST00000465591 MBOAT7Q96N66 472 aa24.65■■□□□ 1.54
LIME1-203ENST00000465591 C22orf23Q9BZE7 217 aa24.65■■□□□ 1.54
LIME1-203ENST00000465591 AGO3Q9H9G7 860 aaKnown RBP24.65■■□□□ 1.54
LIME1-203ENST00000465591 GABBR1Q9UBS5 961 aa24.65■■□□□ 1.54
LIME1-203ENST00000465591 IGSF9BQ9UPX0 1349 aa24.64■■□□□ 1.54
LIME1-203ENST00000465591 SMIM35A0A1B0GVV1 85 aa24.64■■□□□ 1.54
LIME1-203ENST00000465591 PSAPP07602 524 aa24.64■■□□□ 1.54
LIME1-203ENST00000465591 NONOQ15233 471 aaKnown RBP eCLIP24.64■■□□□ 1.54
LIME1-203ENST00000465591 TRMT1LQ7Z2T5 733 aaKnown RBP24.64■■□□□ 1.54
LIME1-203ENST00000465591 APBB2Q92870 758 aa24.64■■□□□ 1.54
LIME1-203ENST00000465591 TNPO1Q92973 898 aaKnown RBP24.64■■□□□ 1.54
LIME1-203ENST00000465591 RIT2Q99578 217 aa24.64■■□□□ 1.54
LIME1-203ENST00000465591 UNC45AQ9H3U1 944 aa24.64■■□□□ 1.54
LIME1-203ENST00000465591 TTC3P53804 2025 aa24.64■■□□□ 1.53
LIME1-203ENST00000465591 LINC01553A4QN01 128 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 CHMP2AO43633 222 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 ZNF862O60290 1169 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 PSMD10O75832 226 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 HTRA4P83105 476 aaPredicted RBP24.63■■□□□ 1.53
LIME1-203ENST00000465591 CCDC85BQ15834 202 aaPredicted RBP24.63■■□□□ 1.53
LIME1-203ENST00000465591 UGCGQ16739 394 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 EARS2Q5JPH6 523 aaKnown RBP24.63■■□□□ 1.53
LIME1-203ENST00000465591 LRCH2Q5VUJ6 765 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 KRT40Q6A162 431 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 KRT25Q7Z3Z0 450 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 NSUN7Q8NE18 718 aaKnown RBP24.63■■□□□ 1.53
LIME1-203ENST00000465591 TOP1MTQ969P6 601 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 DISC1Q9NRI5 854 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 SAMM50Q9Y512 469 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 TRPV2Q9Y5S1 764 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 COL1A2P08123 1366 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 REV3LO60673 3130 aa24.63■■□□□ 1.53
LIME1-203ENST00000465591 WDR64B1ANS9 1081 aa24.62■■□□□ 1.53
LIME1-203ENST00000465591 SLC37A4O43826 429 aa24.62■■□□□ 1.53
LIME1-203ENST00000465591 JAK2O60674 1132 aa24.62■■□□□ 1.53
LIME1-203ENST00000465591 GAS7O60861 476 aa24.62■■□□□ 1.53
LIME1-203ENST00000465591 CD52P31358 61 aa24.62■■□□□ 1.53
LIME1-203ENST00000465591 ZNF484Q5JVG2 852 aa24.62■■□□□ 1.53
LIME1-203ENST00000465591 TSHZ1Q6ZSZ6 1077 aa24.62■■□□□ 1.53
LIME1-203ENST00000465591 CKAP2LQ8IYA6 745 aa24.62■■□□□ 1.53
LIME1-203ENST00000465591 ETNPPLQ8TBG4 499 aa24.62■■□□□ 1.53
LIME1-203ENST00000465591 TEKT3Q9BXF9 490 aa24.62■■□□□ 1.53
LIME1-203ENST00000465591 TCEAL9Q9UHQ7 104 aa24.62■■□□□ 1.53
LIME1-203ENST00000465591 FAM205CA6NFA0 338 aa24.61■■□□□ 1.53
LIME1-203ENST00000465591 LPXNO60711 386 aa24.61■■□□□ 1.53
LIME1-203ENST00000465591 EIF5BO60841 1220 aaKnown RBP24.61■■□□□ 1.53
LIME1-203ENST00000465591 UPP2O95045 317 aa24.61■■□□□ 1.53
LIME1-203ENST00000465591 C22orf31O95567 290 aa24.61■■□□□ 1.53
LIME1-203ENST00000465591 IER5Q5VY09 327 aa24.61■■□□□ 1.53
LIME1-203ENST00000465591 MOXD1Q6UVY6 613 aa24.61■■□□□ 1.53
LIME1-203ENST00000465591 B3GNT9Q6UX72 402 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms