RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ERCC6Q03468 1493 aa6.83□□□□□ -1.32
UBR4-209ENST00000465036 TOP2AP11388 1531 aaKnown RBP6.82□□□□□ -1.32
UBR4-209ENST00000465036 FAM90A27PA6NNH2 459 aa6.82□□□□□ -1.32
UBR4-209ENST00000465036 AQP7O14520 342 aa6.82□□□□□ -1.32
UBR4-209ENST00000465036 RPS19P39019 145 aaKnown RBP6.82□□□□□ -1.32
UBR4-209ENST00000465036 ABHD18Q0P651 414 aa6.82□□□□□ -1.32
UBR4-209ENST00000465036 RAB33AQ14088 237 aa6.82□□□□□ -1.32
UBR4-209ENST00000465036 USP39Q53GS9 565 aaKnown RBP6.82□□□□□ -1.32
UBR4-209ENST00000465036 FIGNQ5HY92 759 aa6.82□□□□□ -1.32
UBR4-209ENST00000465036 CRB2Q5IJ48 1285 aa6.82□□□□□ -1.32
UBR4-209ENST00000465036 BLACEA4D250 179 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 PLSCR1O15162 318 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 NAT1P18440 290 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 ACO1P21399 889 aaKnown RBP6.81□□□□□ -1.32
UBR4-209ENST00000465036 DNAJA1P31689 397 aaKnown RBP6.81□□□□□ -1.32
UBR4-209ENST00000465036 HERVK_113P62684 666 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 FHL2Q14192 279 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 EIF4HQ15056 248 aaKnown RBP6.81□□□□□ -1.32
UBR4-209ENST00000465036 YOD1Q5VVQ6 348 aaPredicted RBP6.81□□□□□ -1.32
UBR4-209ENST00000465036 ARHGAP36Q6ZRI8 547 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 SCUBE1Q8IWY4 988 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 WNK4Q96J92 1243 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 GALNT8Q9NY28 637 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 ARHGAP28Q9P2N2 729 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 ATP23Q9Y6H3 246 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 CADPSQ9ULU8 1353 aa6.81□□□□□ -1.32
UBR4-209ENST00000465036 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.8□□□□□ -1.32
UBR4-209ENST00000465036 MATN2O00339 956 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 ARHGAP6O43182 974 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 PTGS1P23219 599 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 PTH1RQ03431 593 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 WDR72Q3MJ13 1102 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 C16orf59Q7L2K0 433 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 PTPRN2Q92932 1015 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 EXTL1Q92935 676 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 FBXW5Q969U6 566 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 INCENPQ9NQS7 918 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 RIC8BQ9NVN3 520 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 NR2E1Q9Y466 385 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 LAMC3Q9Y6N6 1575 aa6.8□□□□□ -1.32
UBR4-209ENST00000465036 WDR33Q9C0J8 1336 aaKnown RBP6.79□□□□□ -1.32
UBR4-209ENST00000465036 PMS2P1A4D2B8 440 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 ARVCFO00192 962 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 MAN2B1O00754 1011 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 NARSO43776 548 aaKnown RBP6.79□□□□□ -1.32
UBR4-209ENST00000465036 CDC14BO60729 498 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 AMY2AP04746 511 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 AMY2BP19961 511 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 AOAHP28039 575 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 MCM7P33993 719 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 IL13RA1P78552 427 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 TRIM68Q6AZZ1 485 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 PCDH19Q8TAB3 1148 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 SPATA9Q9BWV2 254 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 BTBD2Q9BX70 525 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 AURKAIP1Q9NWT8 199 aaPredicted RBP6.79□□□□□ -1.32
UBR4-209ENST00000465036 BTBD7Q9P203 1132 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 MSRB2Q9Y3D2 182 aa6.79□□□□□ -1.32
UBR4-209ENST00000465036 KIF21AQ7Z4S6 1674 aa6.78□□□□□ -1.32
UBR4-209ENST00000465036 GSTA4O15217 222 aa6.78□□□□□ -1.32
UBR4-209ENST00000465036 ZNF202O95125 648 aa6.78□□□□□ -1.32
UBR4-209ENST00000465036 ACRV1P26436 265 aa6.78□□□□□ -1.32
UBR4-209ENST00000465036 DPTQ07507 201 aa6.78□□□□□ -1.32
UBR4-209ENST00000465036 CFHR4Q92496 578 aa6.78□□□□□ -1.32
UBR4-209ENST00000465036 DPYSL5Q9BPU6 564 aa6.78□□□□□ -1.32
UBR4-209ENST00000465036 PLA2G12BQ9BX93 195 aa6.78□□□□□ -1.32
UBR4-209ENST00000465036 NELFAQ9H3P2 528 aa6.78□□□□□ -1.32
UBR4-209ENST00000465036 ZNF703Q9H7S9 590 aaPredicted RBP6.78□□□□□ -1.32
UBR4-209ENST00000465036 TRAF6Q9Y4K3 522 aa6.78□□□□□ -1.32
UBR4-209ENST00000465036 CCDC88BA6NC98 1476 aa6.78□□□□□ -1.32
UBR4-209ENST00000465036 ADCY3O60266 1144 aa6.77□□□□□ -1.33
UBR4-209ENST00000465036 CLASP2O75122 1294 aaKnown RBP6.77□□□□□ -1.33
UBR4-209ENST00000465036 C4BPAP04003 597 aaKnown RBP6.77□□□□□ -1.33
UBR4-209ENST00000465036 HMGCRP04035 888 aa6.77□□□□□ -1.33
UBR4-209ENST00000465036 PDE6AP16499 860 aa6.77□□□□□ -1.33
UBR4-209ENST00000465036 LACTBP83111 547 aaPredicted RBP6.77□□□□□ -1.33
UBR4-209ENST00000465036 LSM12Q3MHD2 195 aaKnown RBP6.77□□□□□ -1.33
UBR4-209ENST00000465036 IGFL4Q6B9Z1 124 aa6.77□□□□□ -1.33
UBR4-209ENST00000465036 USP30Q70CQ3 517 aa6.77□□□□□ -1.33
UBR4-209ENST00000465036 C1orf210Q8IVY1 113 aa6.77□□□□□ -1.33
UBR4-209ENST00000465036 PUF60Q9UHX1 559 aaKnown RBP6.77□□□□□ -1.33
UBR4-209ENST00000465036 THOC2Q8NI27 1593 aaKnown RBP6.77□□□□□ -1.33
UBR4-209ENST00000465036 PDS5BQ9NTI5 1447 aa6.76□□□□□ -1.33
UBR4-209ENST00000465036 ZNF561-AS1K7EIQ3 104 aa6.76□□□□□ -1.33
UBR4-209ENST00000465036 SUMO1P63165 101 aaKnown RBP6.76□□□□□ -1.33
UBR4-209ENST00000465036 TBR1Q16650 682 aa6.76□□□□□ -1.33
UBR4-209ENST00000465036 LARP4Q71RC2 724 aaKnown RBP eCLIP6.76□□□□□ -1.33
UBR4-209ENST00000465036 MTDHQ86UE4 582 aaKnown RBP6.76□□□□□ -1.33
UBR4-209ENST00000465036 OSTM1Q86WC4 334 aa6.76□□□□□ -1.33
UBR4-209ENST00000465036 IL17DQ8TAD2 202 aa6.76□□□□□ -1.33
UBR4-209ENST00000465036 CACTINQ8WUQ7 758 aaKnown RBP6.76□□□□□ -1.33
UBR4-209ENST00000465036 OR14A2Q96R54 314 aa6.76□□□□□ -1.33
UBR4-209ENST00000465036 CSRNP2Q9H175 543 aa6.76□□□□□ -1.33
UBR4-209ENST00000465036 CATSPERZQ9NTU4 200 aa6.76□□□□□ -1.33
UBR4-209ENST00000465036 CFTRP13569 1480 aa6.76□□□□□ -1.33
UBR4-209ENST00000465036 CUX2O14529 1486 aa6.75□□□□□ -1.33
UBR4-209ENST00000465036 MAFO75444 373 aaPredicted RBP6.75□□□□□ -1.33
UBR4-209ENST00000465036 C6orf222P0C671 652 aaPredicted RBP6.75□□□□□ -1.33
UBR4-209ENST00000465036 RRADP55042 308 aa6.75□□□□□ -1.33
UBR4-209ENST00000465036 CRY1Q16526 586 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms