RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 HTRA4P83105 476 aaPredicted RBP29.34■■■□□ 2.29
U2AF1-206ENST00000464750 GRB10Q13322 594 aa29.34■■■□□ 2.29
U2AF1-206ENST00000464750 LENG9Q96B70 501 aa29.34■■■□□ 2.29
U2AF1-206ENST00000464750 TGS1Q96RS0 853 aaKnown RBP29.34■■■□□ 2.29
U2AF1-206ENST00000464750 MTUS1Q9ULD2 1270 aa29.34■■■□□ 2.29
U2AF1-206ENST00000464750 PCDHA4Q9UN74 947 aa29.34■■■□□ 2.29
U2AF1-206ENST00000464750 PCDHA2Q9Y5H9 948 aa29.34■■■□□ 2.29
U2AF1-206ENST00000464750 FBXO47Q5MNV8 452 aa29.33■■■□□ 2.29
U2AF1-206ENST00000464750 ZNF746Q6NUN9 644 aaPredicted RBP29.33■■■□□ 2.29
U2AF1-206ENST00000464750 PDXDC2PQ6P474 469 aa29.33■■■□□ 2.29
U2AF1-206ENST00000464750 ATP8B4Q8TF62 1192 aa29.33■■■□□ 2.29
U2AF1-206ENST00000464750 GDPD5Q8WTR4 605 aa29.33■■■□□ 2.29
U2AF1-206ENST00000464750 EVPLQ92817 2033 aa29.33■■■□□ 2.29
U2AF1-206ENST00000464750 NLRC5Q86WI3 1866 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 COL4A6Q14031 1691 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 HBP1O60381 514 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 CENPBP07199 599 aaPredicted RBP29.32■■■□□ 2.28
U2AF1-206ENST00000464750 ANAPC15P60006 121 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 ERVK-21P61565 698 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 KRT76Q01546 638 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 SCRN1Q12765 414 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 KRT40Q6A162 431 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 SWSAP1Q6NVH7 229 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 TSHZ1Q6ZSZ6 1077 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 SMAP1Q8IYB5 467 aaPredicted RBP29.32■■■□□ 2.28
U2AF1-206ENST00000464750 TOP1MTQ969P6 601 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 AIFM3Q96NN9 605 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 TRPV2Q9Y5S1 764 aa29.32■■■□□ 2.28
U2AF1-206ENST00000464750 COL1A2P08123 1366 aa29.31■■■□□ 2.28
U2AF1-206ENST00000464750 M0QZ92 97 aa29.31■■■□□ 2.28
U2AF1-206ENST00000464750 EDIL3O43854 480 aa29.31■■■□□ 2.28
U2AF1-206ENST00000464750 UPP2O95045 317 aa29.31■■■□□ 2.28
U2AF1-206ENST00000464750 TMEM62Q0P6H9 643 aa29.31■■■□□ 2.28
U2AF1-206ENST00000464750 IER5Q5VY09 327 aa29.31■■■□□ 2.28
U2AF1-206ENST00000464750 MTHFD1LQ6UB35 978 aa29.31■■■□□ 2.28
U2AF1-206ENST00000464750 SP7Q8TDD2 431 aaPredicted RBP29.31■■■□□ 2.28
U2AF1-206ENST00000464750 YME1L1Q96TA2 773 aa29.31■■■□□ 2.28
U2AF1-206ENST00000464750 REV3LO60673 3130 aa29.31■■■□□ 2.28
U2AF1-206ENST00000464750 SMIM35A0A1B0GVV1 85 aa29.3■■■□□ 2.28
U2AF1-206ENST00000464750 LPXNO60711 386 aa29.3■■■□□ 2.28
U2AF1-206ENST00000464750 CDKL5O76039 1030 aa29.3■■■□□ 2.28
U2AF1-206ENST00000464750 TJAP1Q5JTD0 557 aa29.3■■■□□ 2.28
U2AF1-206ENST00000464750 BLIDQ8IZY5 108 aa29.3■■■□□ 2.28
U2AF1-206ENST00000464750 TBCKQ8TEA7 893 aa29.3■■■□□ 2.28
U2AF1-206ENST00000464750 C22orf23Q9BZE7 217 aa29.3■■■□□ 2.28
U2AF1-206ENST00000464750 SLKQ9H2G2 1235 aaPredicted RBP29.3■■■□□ 2.28
U2AF1-206ENST00000464750 TPCN1Q9ULQ1 816 aa29.3■■■□□ 2.28
U2AF1-206ENST00000464750 PSAPP07602 524 aa29.29■■■□□ 2.28
U2AF1-206ENST00000464750 USP11P51784 963 aa29.29■■■□□ 2.28
U2AF1-206ENST00000464750 CKAP2LQ8IYA6 745 aa29.29■■■□□ 2.28
U2AF1-206ENST00000464750 FAM177A1Q8N128 213 aaPredicted RBP29.29■■■□□ 2.28
U2AF1-206ENST00000464750 DAGLBQ8NCG7 672 aa29.29■■■□□ 2.28
U2AF1-206ENST00000464750 ATXN2LQ8WWM7 1075 aaKnown RBP29.29■■■□□ 2.28
U2AF1-206ENST00000464750 TSPYL2Q9H2G4 693 aaPredicted RBP29.29■■■□□ 2.28
U2AF1-206ENST00000464750 PCDHA10Q9Y5I2 948 aa29.29■■■□□ 2.28
U2AF1-206ENST00000464750 RALGAPA2Q2PPJ7 1873 aa29.29■■■□□ 2.28
U2AF1-206ENST00000464750 MSH4O15457 936 aa29.28■■■□□ 2.28
U2AF1-206ENST00000464750 ATP4AP20648 1035 aa29.28■■■□□ 2.28
U2AF1-206ENST00000464750 KLRC1P26715 233 aa29.28■■■□□ 2.28
U2AF1-206ENST00000464750 NPY5RQ15761 445 aa29.28■■■□□ 2.28
U2AF1-206ENST00000464750 ZNF484Q5JVG2 852 aa29.28■■■□□ 2.28
U2AF1-206ENST00000464750 C17orf80Q9BSJ5 609 aa29.28■■■□□ 2.28
U2AF1-206ENST00000464750 AGO3Q9H9G7 860 aaKnown RBP29.28■■■□□ 2.28
U2AF1-206ENST00000464750 SUGCTQ9HAC7 445 aa29.28■■■□□ 2.28
U2AF1-206ENST00000464750 SAMM50Q9Y512 469 aa29.28■■■□□ 2.28
U2AF1-206ENST00000464750 MAFBQ9Y5Q3 323 aaPredicted RBP29.28■■■□□ 2.28
U2AF1-206ENST00000464750 STK36Q9NRP7 1315 aa29.27■■■□□ 2.28
U2AF1-206ENST00000464750 IGSF9BQ9UPX0 1349 aa29.27■■■□□ 2.28
U2AF1-206ENST00000464750 TTC3P53804 2025 aa29.27■■■□□ 2.28
U2AF1-206ENST00000464750 WDR64B1ANS9 1081 aa29.27■■■□□ 2.28
U2AF1-206ENST00000464750 M0R2N6 131 aa29.27■■■□□ 2.28
U2AF1-206ENST00000464750 PFKFB2O60825 505 aa29.27■■■□□ 2.28
U2AF1-206ENST00000464750 CD52P31358 61 aa29.27■■■□□ 2.28
U2AF1-206ENST00000464750 SKIV2LQ15477 1246 aaKnown RBP29.27■■■□□ 2.28
U2AF1-206ENST00000464750 GALNT17Q6IS24 598 aa29.27■■■□□ 2.28
U2AF1-206ENST00000464750 GABBR1Q9UBS5 961 aa29.27■■■□□ 2.28
U2AF1-206ENST00000464750 SQORQ9Y6N5 450 aa29.27■■■□□ 2.28
U2AF1-206ENST00000464750 TTC28Q96AY4 2481 aa29.26■■■□□ 2.27
U2AF1-206ENST00000464750 ZBTB42B2RXF5 422 aa29.26■■■□□ 2.27
U2AF1-206ENST00000464750 AK2P54819 239 aa29.26■■■□□ 2.27
U2AF1-206ENST00000464750 NME8Q8N427 588 aa29.26■■■□□ 2.27
U2AF1-206ENST00000464750 BBXQ8WY36 941 aaPredicted RBP29.26■■■□□ 2.27
U2AF1-206ENST00000464750 SYMPKQ92797 1274 aaKnown RBP29.26■■■□□ 2.27
U2AF1-206ENST00000464750 CELF4Q9BZC1 486 aaKnown RBP29.26■■■□□ 2.27
U2AF1-206ENST00000464750 KCNJ14Q9UNX9 436 aa29.26■■■□□ 2.27
U2AF1-206ENST00000464750 KDM3AQ9Y4C1 1321 aa29.25■■■□□ 2.27
U2AF1-206ENST00000464750 GAS7O60861 476 aa29.25■■■□□ 2.27
U2AF1-206ENST00000464750 TDP2O95551 362 aa29.25■■■□□ 2.27
U2AF1-206ENST00000464750 ANKRD1Q15327 319 aa29.25■■■□□ 2.27
U2AF1-206ENST00000464750 TRMT1LQ7Z2T5 733 aaKnown RBP29.25■■■□□ 2.27
U2AF1-206ENST00000464750 FBXO22Q8NEZ5 403 aa29.25■■■□□ 2.27
U2AF1-206ENST00000464750 SLC5A5Q92911 643 aa29.25■■■□□ 2.27
U2AF1-206ENST00000464750 RIT2Q99578 217 aa29.25■■■□□ 2.27
U2AF1-206ENST00000464750 TEKT3Q9BXF9 490 aa29.25■■■□□ 2.27
U2AF1-206ENST00000464750 SPTBN5Q9NRC6 3674 aaKnown RBP29.24■■■□□ 2.27
U2AF1-206ENST00000464750 CHMP2AO43633 222 aa29.24■■■□□ 2.27
U2AF1-206ENST00000464750 MRPS5P82675 430 aaKnown RBP29.24■■■□□ 2.27
U2AF1-206ENST00000464750 NONOQ15233 471 aaKnown RBP eCLIP29.24■■■□□ 2.27
U2AF1-206ENST00000464750 Q4G0T1 1027 aa29.24■■■□□ 2.27
U2AF1-206ENST00000464750 LRCH2Q5VUJ6 765 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms