RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZFP69BQ9UJL9 534 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 CROTQ9UKG9 612 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 KRTAP9-6A0A140TA67 174 aa8.46□□□□□ -1.06
PTCD3-205ENST00000464541 DVL2O14641 736 aa8.46□□□□□ -1.06
PTCD3-205ENST00000464541 IL13P35225 146 aa8.46□□□□□ -1.06
PTCD3-205ENST00000464541 SLURP1P55000 103 aa8.46□□□□□ -1.06
PTCD3-205ENST00000464541 RTP5Q14D33 572 aa8.46□□□□□ -1.06
PTCD3-205ENST00000464541 SEPT7Q16181 437 aaKnown RBP8.46□□□□□ -1.06
PTCD3-205ENST00000464541 CXXC5Q7LFL8 322 aaKnown RBP8.46□□□□□ -1.06
PTCD3-205ENST00000464541 PASD1Q8IV76 773 aa8.46□□□□□ -1.06
PTCD3-205ENST00000464541 SMC1BQ8NDV3 1235 aa8.46□□□□□ -1.06
PTCD3-205ENST00000464541 HIPK4Q8NE63 616 aa8.46□□□□□ -1.06
PTCD3-205ENST00000464541 OXSMQ9NWU1 459 aa8.46□□□□□ -1.06
PTCD3-205ENST00000464541 C9orf118A6NHY6 69 aa8.45□□□□□ -1.06
PTCD3-205ENST00000464541 RASSF10A6NK89 507 aa8.45□□□□□ -1.06
PTCD3-205ENST00000464541 ZNF891A8MT65 544 aaPredicted RBP8.45□□□□□ -1.06
PTCD3-205ENST00000464541 GOLGA6L22H0YM25 854 aa8.45□□□□□ -1.06
PTCD3-205ENST00000464541 EPHA7Q15375 998 aa8.45□□□□□ -1.06
PTCD3-205ENST00000464541 VMACQ2NL98 169 aa8.45□□□□□ -1.06
PTCD3-205ENST00000464541 DDX46Q7L014 1031 aaKnown RBP8.45□□□□□ -1.06
PTCD3-205ENST00000464541 ZZZ3Q8IYH5 903 aa8.45□□□□□ -1.06
PTCD3-205ENST00000464541 MARCH10Q8NA82 808 aaPredicted RBP8.45□□□□□ -1.06
PTCD3-205ENST00000464541 CALML6Q8TD86 181 aa8.45□□□□□ -1.06
PTCD3-205ENST00000464541 ADAMTS17Q8TE56 1095 aa8.45□□□□□ -1.06
PTCD3-205ENST00000464541 LEO1Q8WVC0 666 aaPredicted RBP8.45□□□□□ -1.06
PTCD3-205ENST00000464541 BTBD2Q9BX70 525 aa8.45□□□□□ -1.06
PTCD3-205ENST00000464541 L2HGDHQ9H9P8 463 aa8.45□□□□□ -1.06
PTCD3-205ENST00000464541 TRIM13O60858 407 aa8.44□□□□□ -1.06
PTCD3-205ENST00000464541 MAFO75444 373 aaPredicted RBP8.44□□□□□ -1.06
PTCD3-205ENST00000464541 MPIG6BO95866 241 aa8.44□□□□□ -1.06
PTCD3-205ENST00000464541 IL18BPO95998 194 aa8.44□□□□□ -1.06
PTCD3-205ENST00000464541 KNG1P01042 644 aa8.44□□□□□ -1.06
PTCD3-205ENST00000464541 COL6A1P12109 1028 aa8.44□□□□□ -1.06
PTCD3-205ENST00000464541 LSSP48449 732 aa8.44□□□□□ -1.06
PTCD3-205ENST00000464541 KCNC1P48547 511 aa8.44□□□□□ -1.06
PTCD3-205ENST00000464541 MLLT6P55198 1093 aaPredicted RBP8.44□□□□□ -1.06
PTCD3-205ENST00000464541 FZD5Q13467 585 aa8.44□□□□□ -1.06
PTCD3-205ENST00000464541 TRMT10BQ6PF06 316 aaKnown RBP8.44□□□□□ -1.06
PTCD3-205ENST00000464541 ZNF761Q86XN6 746 aaPredicted RBP8.44□□□□□ -1.06
PTCD3-205ENST00000464541 NXPE1Q8N323 547 aa8.44□□□□□ -1.06
PTCD3-205ENST00000464541 ZCCHC14Q8WYQ9 949 aaKnown RBP8.44□□□□□ -1.06
PTCD3-205ENST00000464541 YTHDC1Q96MU7 727 aaKnown RBP8.44□□□□□ -1.06
PTCD3-205ENST00000464541 FOXB1Q99853 325 aa8.44□□□□□ -1.06
PTCD3-205ENST00000464541 FTSJ1Q9UET6 329 aa8.44□□□□□ -1.06
PTCD3-205ENST00000464541 A0A1B0GTL3 188 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 DDX3XO00571 662 aaKnown RBP eCLIP8.43□□□□□ -1.06
PTCD3-205ENST00000464541 SASH1O94885 1247 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 GLRBP48167 497 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 KPNA1P52294 538 aaPredicted RBP8.43□□□□□ -1.06
PTCD3-205ENST00000464541 ADCY1Q08828 1119 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 STILQ15468 1287 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 GPR158Q5T848 1215 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 RNF187Q5TA31 235 aaPredicted RBP8.43□□□□□ -1.06
PTCD3-205ENST00000464541 RTN4RL1Q86UN2 441 aaPredicted RBP8.43□□□□□ -1.06
PTCD3-205ENST00000464541 ADGRG2Q8IZP9 1017 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 STPG3Q8N7X2 389 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 CHTF18Q8WVB6 975 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 FOXRED1Q96CU9 486 aaPredicted RBP8.43□□□□□ -1.06
PTCD3-205ENST00000464541 C16orf92Q96LL3 132 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 KCNC2Q96PR1 638 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 THG1LQ9NWX6 298 aaKnown RBP8.43□□□□□ -1.06
PTCD3-205ENST00000464541 FBXO10Q9UK96 956 aa8.43□□□□□ -1.06
PTCD3-205ENST00000464541 H0Y858 1186 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 ZEB2O60315 1214 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 BPIP17213 487 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 MC4RP32245 332 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 ECE1P42892 770 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 C11orf74Q86VG3 221 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 WDR48Q8TAF3 677 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 USP7Q93009 1102 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 ELF4Q99607 663 aaPredicted RBP8.42□□□□□ -1.06
PTCD3-205ENST00000464541 SPATA25Q9BR10 227 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 TACO1Q9BSH4 297 aaKnown RBP8.42□□□□□ -1.06
PTCD3-205ENST00000464541 AMNQ9BXJ7 453 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 TMEM168Q9H0V1 697 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 SPC25Q9HBM1 224 aa8.42□□□□□ -1.06
PTCD3-205ENST00000464541 SBNO2Q9Y2G9 1366 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 PRAMEF22A3QJZ6 481 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 CPEP16870 476 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 SLC9A1P19634 815 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 GJA9P57773 515 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 IL2P60568 153 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 PHC1P78364 1004 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 ALDH6A1Q02252 535 aaKnown RBP8.41□□□□□ -1.06
PTCD3-205ENST00000464541 LRRC32Q14392 662 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 SKOR2Q2VWA4 1001 aaPredicted RBP8.41□□□□□ -1.06
PTCD3-205ENST00000464541 CT47A1Q5JQC4 288 aaPredicted RBP8.41□□□□□ -1.06
PTCD3-205ENST00000464541 SPOCD1Q6ZMY3 1216 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 FAM124AQ86V42 546 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 TXNDC5Q8NBS9 432 aaKnown RBP8.41□□□□□ -1.06
PTCD3-205ENST00000464541 LCORQ96JN0 433 aaPredicted RBP8.41□□□□□ -1.06
PTCD3-205ENST00000464541 OR10A5Q9H207 317 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 UCKL1Q9NWZ5 548 aa8.41□□□□□ -1.06
PTCD3-205ENST00000464541 CUTAO60888 179 aa8.4□□□□□ -1.06
PTCD3-205ENST00000464541 DNAJC6O75061 913 aa8.4□□□□□ -1.06
PTCD3-205ENST00000464541 KLHL18O94889 574 aa8.4□□□□□ -1.06
PTCD3-205ENST00000464541 FKBP9O95302 570 aa8.4□□□□□ -1.06
PTCD3-205ENST00000464541 CYP1A1P04798 512 aaPredicted RBP8.4□□□□□ -1.06
PTCD3-205ENST00000464541 BMP7P18075 431 aa8.4□□□□□ -1.06
PTCD3-205ENST00000464541 ADCYAP1R1P41586 468 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms