RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 RPS6KA4O75676 772 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 SASH3O75995 380 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 SLC9A1P19634 815 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 NMT1P30419 496 aaKnown RBP9.83□□□□□ -0.84
HPS4-208ENST00000464362 MAGEA9P43362 315 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 RCAN1P53805 252 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 PSMD2Q13200 908 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 NEDD9Q14511 834 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 LRRC14Q15048 493 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 SYDE2Q5VT97 1194 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 FAM47EQ6ZV65 393 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 SRLQ86TD4 932 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 NEK9Q8TD19 979 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 FAM205AQ6ZU69 1335 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 TNS3Q68CZ2 1445 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 OSTNP61366 133 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 APBA1Q02410 837 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 FYB2Q5VWT5 728 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 FBXW10Q5XX13 1052 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 NUGGCQ68CJ6 796 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 METTL13Q8N6R0 699 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 NEDD1Q8NHV4 660 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 WHAMMQ8TF30 809 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 MTA3Q9BTC8 594 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 PAGR1Q9BTK6 254 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 FAM114A2Q9NRY5 505 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 MEGF6O75095 1541 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 LRRIQ3A6PVS8 624 aaPredicted RBP9.83□□□□□ -0.84
HPS4-208ENST00000464362 RASGRF2O14827 1237 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 CD58P19256 250 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 KLRC1P26715 233 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 COPB2P35606 906 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 SARNPP82979 210 aaKnown RBP9.83□□□□□ -0.84
HPS4-208ENST00000464362 DRAP1Q14919 205 aaPredicted RBP9.83□□□□□ -0.84
HPS4-208ENST00000464362 CLUL1Q15846 466 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 BEND6Q5SZJ8 279 aaPredicted RBP9.83□□□□□ -0.84
HPS4-208ENST00000464362 CCNI2Q6ZMN8 369 aaPredicted RBP9.83□□□□□ -0.84
HPS4-208ENST00000464362 CNPY4Q8N129 248 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.83□□□□□ -0.84
HPS4-208ENST00000464362 ZNF446Q9NWS9 450 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 PI4KBQ9UBF8 816 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 PARP2Q9UGN5 583 aa9.83□□□□□ -0.84
HPS4-208ENST00000464362 F5H6K3 240 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 RHOBTB3O94955 611 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 STAT2P52630 851 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 GPSM2P81274 684 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 KLRC3Q07444 240 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 DMP1Q13316 513 aaPredicted RBP9.82□□□□□ -0.84
HPS4-208ENST00000464362 TMED2Q15363 201 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 PDXDC1Q6P996 788 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 PASD1Q8IV76 773 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 PALM2Q8IXS6 379 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 KLHL29Q96CT2 875 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 CEP170P1Q96L14 293 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 NACC1Q96RE7 527 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 ZMYND12Q9H0C1 365 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 RNF14Q9UBS8 474 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 FEZ2Q9UHY8 353 aaPredicted RBP9.82□□□□□ -0.84
HPS4-208ENST00000464362 FBXL5Q9UKA1 691 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 DIP2AQ14689 1571 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 SART1O43290 800 aaKnown RBP9.82□□□□□ -0.84
HPS4-208ENST00000464362 EVX2Q03828 476 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 PTK2Q05397 1052 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 GRM1Q13255 1194 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 KCNB1Q14721 858 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 SLC30A10Q6XR72 485 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 GIMAP8Q8ND71 665 aaPredicted RBP9.82□□□□□ -0.84
HPS4-208ENST00000464362 DYDC2Q96IM9 177 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 PBKQ96KB5 322 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 RILPQ96NA2 401 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 LBHD1Q9BQE6 289 aaPredicted RBP9.82□□□□□ -0.84
HPS4-208ENST00000464362 FERMT1Q9BQL6 677 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 SEPT9Q9UHD8 586 aaPredicted RBP9.82□□□□□ -0.84
HPS4-208ENST00000464362 TTC7AQ9ULT0 858 aaPredicted RBP9.82□□□□□ -0.84
HPS4-208ENST00000464362 SHPRHQ149N8 1683 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 PPLO60437 1756 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 KDM6AO15550 1401 aaPredicted RBP9.82□□□□□ -0.84
HPS4-208ENST00000464362 NTSR2O95665 410 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 RASA1P20936 1047 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 BFSP1Q12934 665 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 KNOP1Q1ED39 458 aaKnown RBP9.82□□□□□ -0.84
HPS4-208ENST00000464362 PPFIBP2Q8ND30 876 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 RSAD2Q8WXG1 361 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 ZNF668Q96K58 619 aaPredicted RBP9.82□□□□□ -0.84
HPS4-208ENST00000464362 TSNARE1Q96NA8 513 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 PCDHB4Q9Y5E5 795 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 MTM1Q13496 603 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 SNCBQ16143 134 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 PKN1Q16512 942 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 CEP63Q96MT8 703 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 PPP1R16BQ96T49 567 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 TRIM51Q9BSJ1 452 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 RAB20Q9NX57 234 aa9.82□□□□□ -0.84
HPS4-208ENST00000464362 NOC2LQ9Y3T9 749 aaKnown RBP9.82□□□□□ -0.84
HPS4-208ENST00000464362 STXBP3O00186 592 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 ECEL1O95672 775 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 POLGP54098 1239 aaPredicted RBP9.81□□□□□ -0.84
HPS4-208ENST00000464362 PSMD6Q15008 389 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 CFAP157Q5JU67 520 aa9.81□□□□□ -0.84
HPS4-208ENST00000464362 ZNF449Q6P9G9 518 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms