RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 RASGRP4Q8TDF6 673 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 CPLX3Q8WVH0 158 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 SHDQ96IW2 340 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 CAPNS2Q96L46 248 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 DDX21Q9NR30 783 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCFD1-204ENST00000463622 ZBTB1Q9Y2K1 713 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 MYH14Q7Z406 1995 aaKnown RBP4.74□□□□□ -1.65
SCFD1-204ENST00000463622 CA12O43570 354 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 INHBBP09529 407 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 BMP7P18075 431 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 NOP2P46087 812 aaKnown RBP4.74□□□□□ -1.65
SCFD1-204ENST00000463622 LAPTM5Q13571 262 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 HLA-DQA1Q5Y7H0 255 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 RPTNQ6XPR3 784 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 FAM9BQ8IZU0 186 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 KLHL6Q8WZ60 621 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 MASTLQ96GX5 879 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 KLHL25Q9H0H3 589 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 SLC52A2Q9HAB3 445 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 RXFP1Q9HBX9 757 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 EPB41L4AQ9HCS5 686 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-204ENST00000463622 TNFRSF12AQ9NP84 129 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 PLA2G2DQ9UNK4 145 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 SF3B6Q9Y3B4 125 aaKnown RBP4.74□□□□□ -1.65
SCFD1-204ENST00000463622 IRAK3Q9Y616 596 aa4.74□□□□□ -1.65
SCFD1-204ENST00000463622 A0A087WZG4 1122 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 STXBP3O00186 592 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 N4BP3O15049 544 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 ENDOUP21128 410 aaKnown RBP4.73□□□□□ -1.65
SCFD1-204ENST00000463622 GJA8P48165 433 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 SLC7A5Q01650 507 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 POU4F1Q01851 419 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 C1orf141Q5JVX7 400 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 CCDC146Q8IYE0 955 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 GPC2Q8N158 579 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 RGS22Q8NE09 1264 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 SIGLEC10Q96LC7 697 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 PTCHD1Q96NR3 888 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 ZNF541Q9H0D2 1346 aa4.73□□□□□ -1.65
SCFD1-204ENST00000463622 ABT1Q9ULW3 272 aaKnown RBP4.73□□□□□ -1.65
SCFD1-204ENST00000463622 ADAMTS7Q9UKP4 1686 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 COL15A1P39059 1388 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 STARD3NLO95772 234 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 HMOX1P09601 288 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 SLC39A6Q13433 755 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 CCDC93Q567U6 631 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 ZNF385BQ569K4 471 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 CYP4F22Q6NT55 531 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 KIAA1211LQ6NV74 962 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 TMEFF1Q8IYR6 380 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 RTKN2Q8IZC4 609 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 MZB1Q8WU39 189 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 ANAPC16Q96DE5 110 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 LGR4Q9BXB1 951 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 ZNF277Q9NRM2 450 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-204ENST00000463622 INPP5FQ9Y2H2 1132 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 DIS3Q9Y2L1 958 aaKnown RBP4.72□□□□□ -1.65
SCFD1-204ENST00000463622 TNRC18O15417 2968 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-204ENST00000463622 A0A1W2PQJ5 194 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 U2SURPO15042 1029 aaKnown RBP4.72□□□□□ -1.65
SCFD1-204ENST00000463622 RNMTO43148 476 aaKnown RBP4.72□□□□□ -1.65
SCFD1-204ENST00000463622 CAMTA2O94983 1202 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 CANXP27824 592 aaKnown RBP4.72□□□□□ -1.65
SCFD1-204ENST00000463622 BICRALQ6AI39 1079 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 SAPCD2Q86UD0 394 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 CPNE8Q86YQ8 564 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 IGDCC3Q8IVU1 814 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 SPATA32Q96LK8 384 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 YTHDC1Q96MU7 727 aaKnown RBP4.72□□□□□ -1.65
SCFD1-204ENST00000463622 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 PHAXQ9H814 394 aaKnown RBP4.72□□□□□ -1.65
SCFD1-204ENST00000463622 WHRNQ9P202 907 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 SUSD2Q9UGT4 822 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 PGAP2Q9UHJ9 254 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 SUGT1Q9Y2Z0 365 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 MRVI1Q9Y6F6 885 aa4.72□□□□□ -1.65
SCFD1-204ENST00000463622 RNF123Q5XPI4 1314 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 COL5A3P25940 1745 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-204ENST00000463622 NRXN2Q9P2S2 1712 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 HRKO00198 91 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 DIAPH1O60610 1272 aaKnown RBP4.71□□□□□ -1.66
SCFD1-204ENST00000463622 NPR1P16066 1061 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 IL6STP40189 918 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-204ENST00000463622 ZNF200P98182 395 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-204ENST00000463622 PLEKHN1Q494U1 663 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-204ENST00000463622 TCERG1LQ5VWI1 586 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 SULT6B1Q6IMI4 303 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 LILRA6Q6PI73 481 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 TTLL10Q6ZVT0 673 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 USP50Q70EL3 339 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-204ENST00000463622 SYNE4Q8N205 404 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 CNBD1Q8NA66 436 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 PHACTR3Q96KR7 559 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 PLEKHF1Q96S99 279 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 TEX13AQ9BXU3 409 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-204ENST00000463622 BCAS3Q9H6U6 928 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 FBLN5Q9UBX5 448 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 APEX2Q9UBZ4 518 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 CGGBP1Q9UFW8 167 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms