RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 KRT40Q6A162 431 aa23.34■■□□□ 1.33
PDLIM4-205ENST00000463615 MICALL1Q8N3F8 863 aa23.34■■□□□ 1.33
PDLIM4-205ENST00000463615 NME8Q8N427 588 aa23.34■■□□□ 1.33
PDLIM4-205ENST00000463615 ATP8B4Q8TF62 1192 aa23.34■■□□□ 1.33
PDLIM4-205ENST00000463615 LENG9Q96B70 501 aa23.34■■□□□ 1.33
PDLIM4-205ENST00000463615 NCOA5Q9HCD5 579 aaKnown RBP23.34■■□□□ 1.33
PDLIM4-205ENST00000463615 COL1A2P08123 1366 aa23.34■■□□□ 1.33
PDLIM4-205ENST00000463615 NCOR1O75376 2440 aa23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 EDIL3O43854 480 aa23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 USP11P51784 963 aa23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 AAK1Q2M2I8 961 aa23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 MIS18BP1Q6P0N0 1132 aa23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 MTHFD1LQ6UB35 978 aa23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 CCDC60Q8IWA6 550 aaPredicted RBP23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 SMAP1Q8IYB5 467 aaPredicted RBP23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 GDPD5Q8WTR4 605 aa23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 YME1L1Q96TA2 773 aa23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 ZNF577Q9BSK1 485 aa23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 VPS54Q9P1Q0 977 aa23.33■■□□□ 1.33
PDLIM4-205ENST00000463615 KRT76Q01546 638 aa23.32■■□□□ 1.32
PDLIM4-205ENST00000463615 TRIM22Q8IYM9 498 aa23.32■■□□□ 1.32
PDLIM4-205ENST00000463615 C17orf80Q9BSJ5 609 aa23.32■■□□□ 1.32
PDLIM4-205ENST00000463615 RC3H2Q9HBD1 1191 aaKnown RBP23.32■■□□□ 1.32
PDLIM4-205ENST00000463615 ZNF302Q9NR11 478 aa23.32■■□□□ 1.32
PDLIM4-205ENST00000463615 MAFBQ9Y5Q3 323 aaPredicted RBP23.32■■□□□ 1.32
PDLIM4-205ENST00000463615 TRPV2Q9Y5S1 764 aa23.32■■□□□ 1.32
PDLIM4-205ENST00000463615 DDX39AO00148 427 aaKnown RBP23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 ENPP3O14638 875 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 BACH1O14867 736 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 DEXIO95424 95 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 ZNF484Q5JVG2 852 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 FBXO22Q8NEZ5 403 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 RASGRP4Q8TDF6 673 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 TRAPPC12Q8WVT3 735 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 ZBTB10Q96DT7 871 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 FTHL17Q9BXU8 183 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 C22orf23Q9BZE7 217 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 FAM49AQ9H0Q0 323 aaPredicted RBP23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 AGO3Q9H9G7 860 aaKnown RBP23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 PPP4R2Q9NY27 417 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 MTUS1Q9ULD2 1270 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 TTC3P53804 2025 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 IGSF9BQ9UPX0 1349 aa23.31■■□□□ 1.32
PDLIM4-205ENST00000463615 ZBTB42B2RXF5 422 aa23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 BMP1P13497 986 aa23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 ATP4AP20648 1035 aa23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 SSRP1Q08945 709 aaKnown RBP23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 PRR16Q569H4 304 aa23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 SWSAP1Q6NVH7 229 aa23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 PDXDC2PQ6P474 469 aa23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 CRIPAKQ8N1N5 446 aa23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 BBXQ8WY36 941 aaPredicted RBP23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 IL17RAQ96F46 866 aa23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 CELF4Q9BZC1 486 aaKnown RBP23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 UPF3BQ9BZI7 483 aaKnown RBP23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 PCDHA10Q9Y5I2 948 aa23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 REV3LO60673 3130 aa23.3■■□□□ 1.32
PDLIM4-205ENST00000463615 M0QZ92 97 aa23.29■■□□□ 1.32
PDLIM4-205ENST00000463615 M0R2N6 131 aa23.29■■□□□ 1.32
PDLIM4-205ENST00000463615 UPP2O95045 317 aa23.29■■□□□ 1.32
PDLIM4-205ENST00000463615 KLRC1P26715 233 aa23.29■■□□□ 1.32
PDLIM4-205ENST00000463615 EPC2Q52LR7 807 aa23.29■■□□□ 1.32
PDLIM4-205ENST00000463615 GALNT17Q6IS24 598 aa23.29■■□□□ 1.32
PDLIM4-205ENST00000463615 DAGLBQ8NCG7 672 aa23.29■■□□□ 1.32
PDLIM4-205ENST00000463615 RIT2Q99578 217 aa23.29■■□□□ 1.32
PDLIM4-205ENST00000463615 PCDHA4Q9UN74 947 aa23.29■■□□□ 1.32
PDLIM4-205ENST00000463615 H3BNC9 293 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 CPLX1O14810 134 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 PPFIA3O75145 1194 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 PSAPP07602 524 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 CD52P31358 61 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 NLRP5P59047 1200 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 SKIV2LQ15477 1246 aaKnown RBP23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 CPLX2Q6PUV4 134 aaKnown RBP23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 KIAA0319LQ8IZA0 1049 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 ADAMTS19Q8TE59 1207 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 LINC01599Q8WXQ3 324 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 HLA-CQ95604 372 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 ZNF689Q96CS4 500 aaPredicted RBP23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 PDRG1Q9NUG6 133 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 MUC3AQ02505 3323 aa23.28■■□□□ 1.32
PDLIM4-205ENST00000463615 CYP3A7-CYP3A51PA0A087WV96 503 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 C5orf67F2Z3F1 127 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 TNFRSF10AO00220 468 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 LINC00271P0C7V0 271 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 CYP3A7P24462 503 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 ANAPC15P60006 121 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 TFF2Q03403 129 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 NPY5RQ15761 445 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 RTN4RL1Q86UN2 441 aaPredicted RBP23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 TMEM192Q8IY95 271 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 SLC5A5Q92911 643 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 MRPL38Q96DV4 380 aaKnown RBP23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 TCEAL9Q9UHQ7 104 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 PADI3Q9ULW8 664 aa23.27■■□□□ 1.32
PDLIM4-205ENST00000463615 RALGAPA2Q2PPJ7 1873 aa23.26■■□□□ 1.31
PDLIM4-205ENST00000463615 WDR64B1ANS9 1081 aa23.26■■□□□ 1.31
PDLIM4-205ENST00000463615 MSH4O15457 936 aa23.26■■□□□ 1.31
PDLIM4-205ENST00000463615 C22orf31O95567 290 aa23.26■■□□□ 1.31
PDLIM4-205ENST00000463615 Q4G0T1 1027 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms