RNA–Protein interactions for RNA: ENST00000462927.5

CYTH4-208, Transcript of cytohesin 4, human

TSL 2

Gene CYTH4, Length 3,667 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYTH4-208	ENST00000462927	SPAG1	Q07617	926 aa		10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	TRIM14	Q14142	442 aa		10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	TMEM132B	Q14DG7	1078 aa		10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	TMEM266	Q2M3C6	531 aa		10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	SPRYD7	Q5W111	196 aa		10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	TTC19	Q6DKK2	380 aa	Predicted RBP	10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	RGMB	Q6NW40	437 aa		10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	ZNF579	Q8NAF0	562 aa	Known RBP	10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	CHP1	Q99653	195 aa		10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	SELENOO	Q9BVL4	669 aa		10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	HAUS4	Q9H6D7	363 aa		10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	ACAD9	Q9H845	621 aa		10.8	□□□□□ -0.68
CYTH4-208	ENST00000462927	PP2D1	A8MPX8	630 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	TOMM70	O94826	608 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	CP	P00450	1065 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	PBX1	P40424	430 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	IRAK1	P51617	712 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	COPB1	P53618	953 aa	Known RBP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	RPS6	P62753	249 aa	Known RBP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	ARHGAP4	P98171	946 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	AMPD2	Q01433	879 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	CALCRL	Q16602	461 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	ARHGEF16	Q5VV41	709 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	IQCE	Q6IPM2	695 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	APTX	Q7Z2E3	356 aa	Known RBP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	PAGE5	Q96GU1	130 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	DDX25	Q9UHL0	483 aa	Known RBP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	KCNH4	Q9UQ05	1017 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	ATP1A1	P05023	1023 aa	Known RBP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	TRIM21	P19474	475 aa	Known RBP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	MAP2K2	P36507	400 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	ASIC1	P78348	528 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	PPFIA1	Q13136	1202 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	BAAT	Q14032	418 aa	Predicted RBP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	CDKAL1	Q5VV42	579 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	FBXW10	Q5XX13	1052 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	CCDC47	Q96A33	483 aa	Known RBP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	JAKMIP2	Q96AA8	810 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	RIPK3	Q9Y572	518 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	ITIH6	Q6UXX5	1313 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	WNT7A	O00755	349 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	MEIS2	O14770	477 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	RNASE9	P60153	205 aa	Known RBP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	DYM	Q7RTS9	669 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	TRAPPC11	Q7Z392	1133 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	POTED	Q86YR6	584 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	ANKRD13C	Q8N6S4	541 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	RPGRIP1	Q96KN7	1286 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	TBC1D7	Q9P0N9	293 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	LUC7L2	Q9Y383	392 aa	Known RBP	10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	SAMM50	Q9Y512	469 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	IVNS1ABP	Q9Y6Y0	642 aa		10.79	□□□□□ -0.68
CYTH4-208	ENST00000462927	KIF3C	O14782	793 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	CUL4B	Q13620	913 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	TAF1C	Q15572	869 aa	Predicted RBP	10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	MB21D1	Q8N884	522 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	EHBP1	Q8NDI1	1231 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	TNFRSF25	Q93038	417 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	GSDMA	Q96QA5	445 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	CEP89	Q96ST8	783 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	RMDN3	Q96TC7	470 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	MACROD2	A1Z1Q3	448 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	TMEM88B	A6NKF7	163 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	BTBD19	C9JJ37	291 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	KRT86	O43790	486 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	OR52Z1	P0C646	297 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	OR8K1	Q8NGG5	319 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	RAB34	Q9BZG1	259 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	POLD4	Q9HCU8	107 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	TFR2	Q9UP52	801 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	ZNF536	O15090	1300 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	TESPA1	A2RU30	521 aa	Predicted RBP	10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	KCNJ18	B7U540	433 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	TEC	P42680	631 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	KCNJ12	Q14500	433 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	KCTD2	Q14681	263 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	SAPCD2	Q86UD0	394 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	BRI3BP	Q8WY22	251 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	SPATC1L	Q9H0A9	340 aa		10.78	□□□□□ -0.68
CYTH4-208	ENST00000462927	TARSL2	A2RTX5	802 aa	Known RBP	10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	RNF225	M0QZC1	329 aa	Predicted RBP	10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	NDUFAB1	O14561	156 aa		10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	OPA1	O60313	960 aa		10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	ZBTB48	P10074	688 aa	Predicted RBP	10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	HNRNPH1	P31943	449 aa	Known RBP	10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	KRT83	P78385	493 aa		10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	CCNA1	P78396	465 aa		10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	PAK1	Q13153	545 aa		10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	TEX2	Q8IWB9	1127 aa		10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	OTUD6B	Q8N6M0	293 aa		10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	FERMT2	Q96AC1	680 aa		10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	NAP1L4	Q99733	375 aa	Known RBP	10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	CENPH	Q9H3R5	247 aa		10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	ZNF214	Q9UL59	606 aa	Predicted RBP	10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	GDA	Q9Y2T3	454 aa		10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	CAPN7	Q9Y6W3	813 aa		10.77	□□□□□ -0.68
CYTH4-208	ENST00000462927	PPP1R3G	B7ZBB8	358 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms