RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 PLA2G5P39877 138 aa18.36■□□□□ 0.53
COL7A1-204ENST00000462475 AP3B2Q13367 1082 aa18.36■□□□□ 0.53
COL7A1-204ENST00000462475 TSGA10IPQ3SY00 556 aa18.36■□□□□ 0.53
COL7A1-204ENST00000462475 ZNF713Q8N859 430 aaPredicted RBP18.36■□□□□ 0.53
COL7A1-204ENST00000462475 CLDND1Q9NY35 253 aa18.36■□□□□ 0.53
COL7A1-204ENST00000462475 IGSF9BQ9UPX0 1349 aa18.35■□□□□ 0.53
COL7A1-204ENST00000462475 POTEB3A0JP26 581 aa18.35■□□□□ 0.53
COL7A1-204ENST00000462475 M0QZ92 97 aa18.35■□□□□ 0.53
COL7A1-204ENST00000462475 ATG7O95352 703 aa18.35■□□□□ 0.53
COL7A1-204ENST00000462475 SSTR3P32745 418 aaPredicted RBP18.35■□□□□ 0.53
COL7A1-204ENST00000462475 PUS10Q3MIT2 529 aaKnown RBP18.35■□□□□ 0.53
COL7A1-204ENST00000462475 POTEBQ6S5H4 581 aa18.35■□□□□ 0.53
COL7A1-204ENST00000462475 CRIPAKQ8N1N5 446 aa18.35■□□□□ 0.53
COL7A1-204ENST00000462475 LMAN2LQ9H0V9 348 aa18.35■□□□□ 0.53
COL7A1-204ENST00000462475 PADI3Q9ULW8 664 aa18.35■□□□□ 0.53
COL7A1-204ENST00000462475 MRPL42Q9Y6G3 142 aaKnown RBP18.35■□□□□ 0.53
COL7A1-204ENST00000462475 SQORQ9Y6N5 450 aa18.35■□□□□ 0.53
COL7A1-204ENST00000462475 TTC3P53804 2025 aa18.35■□□□□ 0.53
COL7A1-204ENST00000462475 MYO7AQ13402 2215 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 ATG2AQ2TAZ0 1938 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 IGKV6D-21A0A0A0MT36 114 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 SMIM35A0A1B0GVV1 85 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 FAM86B1E9PN63 330 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 ADAMTS3O15072 1205 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 GPR37L1O60883 481 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 FAM86B2P0C5J1 330 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 CPA1P15085 419 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 ZNF76P36508 570 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 HYAL1Q12794 435 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 PAK2Q13177 524 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 JAKMIP3Q5VZ66 844 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 MTHFD1LQ6UB35 978 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 NPAS4Q8IUM7 802 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 CCDC60Q8IWA6 550 aaPredicted RBP18.34■□□□□ 0.53
COL7A1-204ENST00000462475 TNPO1Q92973 898 aaKnown RBP18.34■□□□□ 0.53
COL7A1-204ENST00000462475 UIMC1Q96RL1 719 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 FTHL17Q9BXU8 183 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 CELF4Q9BZC1 486 aaKnown RBP18.34■□□□□ 0.53
COL7A1-204ENST00000462475 TMX1Q9H3N1 280 aa18.34■□□□□ 0.53
COL7A1-204ENST00000462475 ALG13Q9NP73 1137 aaKnown RBP18.34■□□□□ 0.53
COL7A1-204ENST00000462475 NAP1L2Q9ULW6 460 aaPredicted RBP18.34■□□□□ 0.53
COL7A1-204ENST00000462475 KDM3AQ9Y4C1 1321 aa18.33■□□□□ 0.53
COL7A1-204ENST00000462475 BACH1O14867 736 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 CDC45O75419 566 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 MMP1P03956 469 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 ADD1P35611 737 aaKnown RBP18.33■□□□□ 0.52
COL7A1-204ENST00000462475 LTBRP36941 435 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 GATMP50440 423 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 SLC26A2P50443 739 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 RCAN1P53805 252 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 KRT76Q01546 638 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 CAMK1Q14012 370 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 KRT32Q14532 448 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 TMEM266Q2M3C6 531 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 CTC1Q2NKJ3 1217 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 PAN2Q504Q3 1202 aaKnown RBP18.33■□□□□ 0.52
COL7A1-204ENST00000462475 ABHD15Q6UXT9 468 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 CENPQQ7L2Z9 268 aaPredicted RBP18.33■□□□□ 0.52
COL7A1-204ENST00000462475 NIPA1Q7RTP0 329 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 PLA2G4DQ86XP0 818 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 CMTR2Q8IYT2 770 aaKnown RBP18.33■□□□□ 0.52
COL7A1-204ENST00000462475 ATP8B4Q8TF62 1192 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 CRYGNQ8WXF5 182 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 FAM122AQ96E09 287 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 GLT8D2Q9H1C3 349 aa18.33■□□□□ 0.52
COL7A1-204ENST00000462475 IGLV3-22A0A075B6J6 115 aa18.32■□□□□ 0.52
COL7A1-204ENST00000462475 DHX15O43143 795 aaKnown RBP18.32■□□□□ 0.52
COL7A1-204ENST00000462475 SCG2P13521 617 aa18.32■□□□□ 0.52
COL7A1-204ENST00000462475 KLRC1P26715 233 aa18.32■□□□□ 0.52
COL7A1-204ENST00000462475 GTF2F1P35269 517 aaKnown RBP eCLIP18.32■□□□□ 0.52
COL7A1-204ENST00000462475 METAP2P50579 478 aaKnown RBP eCLIP18.32■□□□□ 0.52
COL7A1-204ENST00000462475 DLX2Q07687 328 aaPredicted RBP18.32■□□□□ 0.52
COL7A1-204ENST00000462475 CLUL1Q15846 466 aa18.32■□□□□ 0.52
COL7A1-204ENST00000462475 PFKFB3Q16875 520 aaPredicted RBP18.32■□□□□ 0.52
COL7A1-204ENST00000462475 PLVAPQ9BX97 442 aa18.32■□□□□ 0.52
COL7A1-204ENST00000462475 PLAGL2Q9UPG8 496 aa18.32■□□□□ 0.52
COL7A1-204ENST00000462475 HCN4Q9Y3Q4 1203 aa18.32■□□□□ 0.52
COL7A1-204ENST00000462475 ZBTB42B2RXF5 422 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 HBP1O60381 514 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 IBSPP21815 317 aaPredicted RBP18.31■□□□□ 0.52
COL7A1-204ENST00000462475 DNAJB1P25685 340 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 ZP2Q05996 745 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 APOBRQ0VD83 1088 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 FAM160B1Q5W0V3 765 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 PDXDC2PQ6P474 469 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 NME8Q8N427 588 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 TMEM40Q8WWA1 233 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 CDHR5Q9HBB8 845 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 ZNF302Q9NR11 478 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 GINS2Q9Y248 185 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 C5orf42Q9H799 3197 aa18.31■□□□□ 0.52
COL7A1-204ENST00000462475 ESYT2A0FGR8 921 aa18.3■□□□□ 0.52
COL7A1-204ENST00000462475 IPO5O00410 1097 aaKnown RBP18.3■□□□□ 0.52
COL7A1-204ENST00000462475 LINC01565O15544 149 aa18.3■□□□□ 0.52
COL7A1-204ENST00000462475 NCK2O43639 380 aa18.3■□□□□ 0.52
COL7A1-204ENST00000462475 MGEA5O60502 916 aa18.3■□□□□ 0.52
COL7A1-204ENST00000462475 TBX10O75333 385 aa18.3■□□□□ 0.52
COL7A1-204ENST00000462475 ITGB1P05556 798 aa18.3■□□□□ 0.52
COL7A1-204ENST00000462475 CYP3A4P08684 503 aa18.3■□□□□ 0.52
COL7A1-204ENST00000462475 HMGB1P09429 215 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms