RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ZNF746Q6NUN9 644 aaPredicted RBP17.4■□□□□ 0.38
VARS-219ENST00000461328 FAM117BQ6P1L5 589 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 PDXDC2PQ6P474 469 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 POTEBQ6S5H4 581 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 ABHD15Q6UXT9 468 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 PIK3AP1Q6ZUJ8 805 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 CKAP2LQ8IYA6 745 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 MYOCDQ8IZQ8 938 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 PPM1EQ8WY54 764 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 LENG9Q96B70 501 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 ZBTB10Q96DT7 871 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 ZSCAN31Q96LW9 406 aaPredicted RBP17.4■□□□□ 0.38
VARS-219ENST00000461328 KIF2CQ99661 725 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 IFIH1Q9BYX4 1025 aaKnown RBP17.4■□□□□ 0.38
VARS-219ENST00000461328 OSBPL7Q9BZF2 842 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 FAM49AQ9H0Q0 323 aaPredicted RBP17.4■□□□□ 0.38
VARS-219ENST00000461328 ZNF302Q9NR11 478 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 SH2B1Q9NRF2 756 aaPredicted RBP17.4■□□□□ 0.38
VARS-219ENST00000461328 PTPRSQ13332 1948 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 IGKV6D-21A0A0A0MT36 114 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 MSH4O15457 936 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 CHMP2AO43633 222 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 RPLP2P05387 115 aaKnown RBP17.39■□□□□ 0.37
VARS-219ENST00000461328 PSAPP07602 524 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 GHRP10912 638 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 FDPSP14324 419 aaKnown RBP17.39■□□□□ 0.37
VARS-219ENST00000461328 ST3GAL1Q11201 340 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 LRCH2Q5VUJ6 765 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 SWSAP1Q6NVH7 229 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 NEK8Q86SG6 692 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 CCDC60Q8IWA6 550 aaPredicted RBP17.39■□□□□ 0.37
VARS-219ENST00000461328 SMAP1Q8IYB5 467 aaPredicted RBP17.39■□□□□ 0.37
VARS-219ENST00000461328 OXER1Q8TDS5 423 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 TRAPPC12Q8WVT3 735 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 ARNTL2Q8WYA1 636 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 APBB2Q92870 758 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 RAD9AQ99638 391 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 TEKT3Q9BXF9 490 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 DDX25Q9UHL0 483 aaKnown RBP17.39■□□□□ 0.37
VARS-219ENST00000461328 CDH23Q9H251 3354 aa17.39■□□□□ 0.37
VARS-219ENST00000461328 LCHNA4D1U4 455 aa17.38■□□□□ 0.37
VARS-219ENST00000461328 WDR64B1ANS9 1081 aa17.38■□□□□ 0.37
VARS-219ENST00000461328 HBP1O60381 514 aa17.38■□□□□ 0.37
VARS-219ENST00000461328 ARHGEF15O94989 841 aa17.38■□□□□ 0.37
VARS-219ENST00000461328 MGAT3Q09327 533 aa17.38■□□□□ 0.37
VARS-219ENST00000461328 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
VARS-219ENST00000461328 Q4G0T1 1027 aa17.38■□□□□ 0.37
VARS-219ENST00000461328 IER5Q5VY09 327 aa17.38■□□□□ 0.37
VARS-219ENST00000461328 USP38Q8NB14 1042 aa17.38■□□□□ 0.37
VARS-219ENST00000461328 ATP8B4Q8TF62 1192 aa17.38■□□□□ 0.37
VARS-219ENST00000461328 PCDHA2Q9Y5H9 948 aa17.38■□□□□ 0.37
VARS-219ENST00000461328 CDY2AQ9Y6F7 541 aa17.38■□□□□ 0.37
VARS-219ENST00000461328 M0QZ92 97 aa17.37■□□□□ 0.37
VARS-219ENST00000461328 MRPS6P82932 125 aaKnown RBP17.37■□□□□ 0.37
VARS-219ENST00000461328 NR5A1Q13285 461 aa17.37■□□□□ 0.37
VARS-219ENST00000461328 CCDC85BQ15834 202 aaPredicted RBP17.37■□□□□ 0.37
VARS-219ENST00000461328 MOXD1Q6UVY6 613 aa17.37■□□□□ 0.37
VARS-219ENST00000461328 FAM184AQ8NB25 1140 aa17.37■□□□□ 0.37
VARS-219ENST00000461328 SLC5A5Q92911 643 aa17.37■□□□□ 0.37
VARS-219ENST00000461328 RIT2Q99578 217 aa17.37■□□□□ 0.37
VARS-219ENST00000461328 LLPHQ9BRT6 129 aaKnown RBP17.37■□□□□ 0.37
VARS-219ENST00000461328 PCDHA10Q9Y5I2 948 aa17.37■□□□□ 0.37
VARS-219ENST00000461328 CHD7Q9P2D1 2997 aa17.37■□□□□ 0.37
VARS-219ENST00000461328 MICAL3Q7RTP6 2002 aa17.37■□□□□ 0.37
VARS-219ENST00000461328 EYSQ5T1H1 3165 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 CYP3A7-CYP3A51PA0A087WV96 503 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 RFXAPO00287 272 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 DLL1O00548 723 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 EDIL3O43854 480 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 MARCH6O60337 910 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 CCNT1O60563 726 aaKnown RBP17.36■□□□□ 0.37
VARS-219ENST00000461328 MMP1P03956 469 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 GCFC2P16383 781 aaKnown RBP17.36■□□□□ 0.37
VARS-219ENST00000461328 CYP3A7P24462 503 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 JAK3P52333 1124 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 HMGN5P82970 282 aaKnown RBP17.36■□□□□ 0.37
VARS-219ENST00000461328 TMEM62Q0P6H9 643 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 LPIN1Q14693 890 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 SAFBQ15424 915 aaKnown RBP eCLIP17.36■□□□□ 0.37
VARS-219ENST00000461328 KRT40Q6A162 431 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 MTHFD1LQ6UB35 978 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 TRMT1LQ7Z2T5 733 aaKnown RBP17.36■□□□□ 0.37
VARS-219ENST00000461328 DIS3L2Q8IYB7 885 aaKnown RBP17.36■□□□□ 0.37
VARS-219ENST00000461328 MICALL1Q8N3F8 863 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 GJA10Q969M2 543 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 C8orf76Q96K31 380 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 NAP1L4Q99733 375 aaKnown RBP17.36■□□□□ 0.37
VARS-219ENST00000461328 DISC1Q9NRI5 854 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 GABBR1Q9UBS5 961 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 INSL6Q9Y581 213 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 MAFBQ9Y5Q3 323 aaPredicted RBP17.36■□□□□ 0.37
VARS-219ENST00000461328 TRPV2Q9Y5S1 764 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 COL1A2P08123 1366 aa17.36■□□□□ 0.37
VARS-219ENST00000461328 SMIM35A0A1B0GVV1 85 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 EPOPA6NHQ4 379 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 GTPBP6O43824 516 aaPredicted RBP17.35■□□□□ 0.37
VARS-219ENST00000461328 SLC37A4O43826 429 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 UPP2O95045 317 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 KLRC1P26715 233 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 SFNP31947 248 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms