RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 DLX2Q07687 328 aaPredicted RBP16.66■□□□□ 0.26
DNMT3A-207ENST00000461228 PAK2Q13177 524 aa16.66■□□□□ 0.26
DNMT3A-207ENST00000461228 ODR4Q5SWX8 454 aa16.66■□□□□ 0.26
DNMT3A-207ENST00000461228 PDE12Q6L8Q7 609 aaKnown RBP16.66■□□□□ 0.26
DNMT3A-207ENST00000461228 TMTC3Q6ZXV5 915 aa16.66■□□□□ 0.26
DNMT3A-207ENST00000461228 NIPA1Q7RTP0 329 aa16.66■□□□□ 0.26
DNMT3A-207ENST00000461228 EDAQ92838 391 aa16.66■□□□□ 0.26
DNMT3A-207ENST00000461228 FBXL18Q96ME1 805 aa16.66■□□□□ 0.26
DNMT3A-207ENST00000461228 CFAP54Q96N23 3096 aa16.66■□□□□ 0.26
DNMT3A-207ENST00000461228 AGO3Q9H9G7 860 aaKnown RBP16.66■□□□□ 0.26
DNMT3A-207ENST00000461228 C1orf112Q9NSG2 853 aa16.66■□□□□ 0.26
DNMT3A-207ENST00000461228 EVPLQ92817 2033 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 IGKV6D-21A0A0A0MT36 114 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 LOC730098B7Z3J9 87 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 PLEKHA8P1O95397 391 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 FOSP01100 380 aaPredicted RBP16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 ITGB1P05556 798 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 INSRRP14616 1297 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 CD52P31358 61 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 NDUFV1P49821 464 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 AP3B2Q13367 1082 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 RNF135Q8IUD6 432 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 SRBD1Q8N5C6 995 aaKnown RBP16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 PCYT2Q99447 389 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 GLT8D2Q9H1C3 349 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 KCNH7Q9NS40 1196 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 PADI3Q9ULW8 664 aa16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 RBM8AQ9Y5S9 174 aaKnown RBP16.65■□□□□ 0.26
DNMT3A-207ENST00000461228 CCDC69A6NI79 296 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 STXBP3O00186 592 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 PRC1O43663 620 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 ATG7O95352 703 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 MARK3P27448 753 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 SARSP49591 514 aaKnown RBP16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 RCAN1P53805 252 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 ZNF710Q8N1W2 664 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 SPPL3Q8TCT6 385 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 RASGRP4Q8TDF6 673 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 RSPH1Q8WYR4 309 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 SDF4Q9BRK5 362 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 CELF4Q9BZC1 486 aaKnown RBP16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 CLEC1BQ9P126 229 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 MUTYHQ9UIF7 546 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 LZTS1Q9Y250 596 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 SUPT16HQ9Y5B9 1047 aaKnown RBP16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 CNTNAP5Q8WYK1 1306 aa16.64■□□□□ 0.25
DNMT3A-207ENST00000461228 DENND4AQ7Z401 1863 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 GLP2RO95838 553 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 ACTR2P61160 394 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 PLCB4Q15147 1175 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 CEP55Q53EZ4 464 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 EP400NLQ6ZTU2 488 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 ALYREFQ86V81 257 aaKnown RBP16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 KLHL23Q8NBE8 558 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 EXOC6Q8TAG9 804 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 SUSD6Q92537 303 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 MXRA8Q9BRK3 442 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 MYL10Q9BUA6 226 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 AAASQ9NRG9 546 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 PCDHA6Q9UN73 950 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 TRPC6Q9Y210 931 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 PCDHA8Q9Y5H6 950 aa16.63■□□□□ 0.25
DNMT3A-207ENST00000461228 SRGAP2BP0DMP2 458 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 DNAJB1P25685 340 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 SREBF1P36956 1147 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 STAT5BP51692 787 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 NUBP1P53384 320 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 PTPN5P54829 565 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 KRT76Q01546 638 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 TMEM184AQ6ZMB5 413 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 RTN4RL1Q86UN2 441 aaPredicted RBP16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 ATP8B4Q8TF62 1192 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 POF1BQ8WVV4 589 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 ELAC1Q9H777 363 aaKnown RBP16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 ERVK-5Q9HDB9 667 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 ALG13Q9NP73 1137 aaKnown RBP16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 RIC8AQ9NPQ8 531 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 TLR9Q9NR96 1032 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 RBM28Q9NW13 759 aaKnown RBP16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 SLC12A7Q9Y666 1083 aa16.62■□□□□ 0.25
DNMT3A-207ENST00000461228 LINC01565O15544 149 aa16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 HBP1O60381 514 aa16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 UBE2SQ16763 222 aa16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 MTHFD1LQ6UB35 978 aa16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 TRIM67Q6ZTA4 783 aa16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 SLC24A5Q71RS6 500 aa16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 FANCBQ8NB91 859 aa16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 PHF7Q9BWX1 381 aaPredicted RBP16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 FAM49AQ9H0Q0 323 aaPredicted RBP16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 TMX1Q9H3N1 280 aa16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 RGS18Q9NS28 235 aa16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 PCDHB12Q9Y5F1 795 aa16.61■□□□□ 0.25
DNMT3A-207ENST00000461228 MEIS1O00470 390 aa16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 FSCN2O14926 492 aa16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 CLK2P49760 499 aaKnown RBP16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 SETQ01105 290 aaPredicted RBP16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 ITGB3BPQ13352 177 aaPredicted RBP16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 KCNC3Q14003 757 aa16.6■□□□□ 0.25
DNMT3A-207ENST00000461228 FAM160B1Q5W0V3 765 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms