RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 UBE3CQ15386 1083 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 KIAA1755Q5JYT7 1200 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 NUGGCQ68CJ6 796 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 C1orf228Q6PIY5 440 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 RBM41Q96IZ5 413 aaKnown RBP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 POLR3EQ9NVU0 708 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 ATP10DQ9P241 1426 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 EIF3DO15371 548 aaKnown RBP eCLIP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 ARPP19P56211 112 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 COPS2P61201 443 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 SLFN12LQ6IEE8 588 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 ANO5Q75V66 913 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 HINFPQ9BQA5 517 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 GCOM2Q9BZD3 368 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 RPF1Q9H9Y2 349 aaKnown RBP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 NXF1Q9UBU9 619 aaKnown RBP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 KIAA0232Q92628 1395 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 FAM135BQ49AJ0 1406 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 ERVV-2B6SEH9 535 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 M0R2C6 588 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 MYO1DO94832 1006 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 PSAPP07602 524 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 PDIA3P30101 505 aaKnown RBP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 AP2B1P63010 937 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 TRIP13Q15645 432 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 SDR42E1Q8WUS8 393 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 ULK4Q96C45 1275 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 ZFP69BQ9UJL9 534 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 PCDHA5Q9Y5H7 936 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 CC2D2AQ9P2K1 1620 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 HADHAP40939 763 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 SERPINB10P48595 397 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 MRPL28Q13084 256 aaKnown RBP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 EFTUD2Q15029 972 aaKnown RBP eCLIP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 TBC1D1Q86TI0 1168 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 ERICH1Q86X53 443 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 DNAJC10Q8IXB1 793 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 FBXO18Q8NFZ0 1043 aa9.64□□□□□ -0.87
BRCA1-205ENST00000461221 GFM2Q969S9 779 aaKnown RBP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 BLMP54132 1417 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-205ENST00000461221 A0A0D9SFI3 127 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 A0A0G2JND7 137 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 ZNF263O14978 683 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 TTLL1O95922 423 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 PSMA2P25787 234 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 EIF4A3P38919 411 aaKnown RBP9.63□□□□□ -0.87
BRCA1-205ENST00000461221 SKOR1P84550 965 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 KHDRBS2Q5VWX1 349 aaKnown RBP9.63□□□□□ -0.87
BRCA1-205ENST00000461221 TEX9Q8N6V9 391 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 TTC8Q8TAM2 541 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 TTC17Q96AE7 1141 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 PANX2Q96RD6 677 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 GTSE1Q9NYZ3 720 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 ARHGEF10O15013 1369 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 ZMYND10O75800 440 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 ZNF189O75820 626 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-205ENST00000461221 CCDC159P0C7I6 412 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 CARSP49589 748 aaKnown RBP9.63□□□□□ -0.87
BRCA1-205ENST00000461221 TFDP2Q14188 446 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 TAGAPQ8N103 731 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 SAAL1Q96ER3 474 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 RNF103-CHMP3A0A140T963 221 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 CHUKO15111 745 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 LDHAP00338 332 aaKnown RBP9.63□□□□□ -0.87
BRCA1-205ENST00000461221 ATXN8OSP0DMR3 200 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 IL13P35225 146 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 HABP4Q5JVS0 413 aaKnown RBP9.63□□□□□ -0.87
BRCA1-205ENST00000461221 C1orf146Q5VVC0 180 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 DSTYKQ6XUX3 929 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 IFT43Q96FT9 208 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 PCIF1Q9H4Z3 704 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 PARVGQ9HBI0 331 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 SAYSD1Q9NPB0 183 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 ZMYM3Q14202 1370 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 A2MP01023 1474 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 ZMYM4Q5VZL5 1548 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 GFAPP14136 432 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 CCNE1P24864 410 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 KCNA1Q09470 495 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 MAPRE2Q15555 327 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 TTC23LQ6PF05 361 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 RGS9BPQ6ZS82 235 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 CNKSR1Q969H4 720 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 DYDC2Q96IM9 177 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 BTBD6Q96KE9 485 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 CCDC90BQ9GZT6 254 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 PYCARDQ9ULZ3 195 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 SYNGAP1Q96PV0 1343 aa9.63□□□□□ -0.87
BRCA1-205ENST00000461221 MIF4GDA9UHW6 222 aaKnown RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 MMEP08473 750 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 SMARCA1P28370 1054 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 CCDC92Q53HC0 331 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 THEM5Q8N1Q8 247 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 LMTK3Q96Q04 1460 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 EMILIN3Q9NT22 766 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 CLIC2O15247 247 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 HAUS5O94927 633 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 GSPT1P15170 499 aaKnown RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 PTH1RQ03431 593 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 LRRC63Q05C16 580 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms