RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 IL9P15248 144 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 IBSPP21815 317 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-206ENST00000461217 SSTR3P32745 418 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-206ENST00000461217 BMPR1AP36894 532 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 SLC26A2P50443 739 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 RCAN1P53805 252 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 FAM160B1Q5W0V3 765 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 PLA2G4DQ86XP0 818 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 FTHL17Q9BXU8 183 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 C22orf23Q9BZE7 217 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 CLDND1Q9NY35 253 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 GINS2Q9Y248 185 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 PCDHA2Q9Y5H9 948 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 C5orf67F2Z3F1 127 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 MEIS1O00470 390 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 SCG2P13521 617 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 CPA1P15085 419 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 ADD1P35611 737 aaKnown RBP17.18■□□□□ 0.34
COL16A1-206ENST00000461217 CLK2P49760 499 aaKnown RBP17.18■□□□□ 0.34
COL16A1-206ENST00000461217 APOBRQ0VD83 1088 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 PFKFB3Q16875 520 aaPredicted RBP17.18■□□□□ 0.34
COL16A1-206ENST00000461217 PUS10Q3MIT2 529 aaKnown RBP17.18■□□□□ 0.34
COL16A1-206ENST00000461217 MTHFD1LQ6UB35 978 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 Q6ZUG5 572 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 NIPA1Q7RTP0 329 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 CCDC12Q8WUD4 166 aaPredicted RBP17.18■□□□□ 0.34
COL16A1-206ENST00000461217 LINC01599Q8WXQ3 324 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 PABPC5Q96DU9 382 aaKnown RBP17.18■□□□□ 0.34
COL16A1-206ENST00000461217 JAKMIP1Q96N16 626 aaKnown RBP17.18■□□□□ 0.34
COL16A1-206ENST00000461217 UIMC1Q96RL1 719 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 CELF4Q9BZC1 486 aaKnown RBP17.18■□□□□ 0.34
COL16A1-206ENST00000461217 LMAN2LQ9H0V9 348 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
COL16A1-206ENST00000461217 FAM217BQ9NTX9 383 aaPredicted RBP17.18■□□□□ 0.34
COL16A1-206ENST00000461217 TCEAL9Q9UHQ7 104 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 PADI3Q9ULW8 664 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 SQORQ9Y6N5 450 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 XIRP2A4UGR9 3374 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 IGSF9BQ9UPX0 1349 aa17.18■□□□□ 0.34
COL16A1-206ENST00000461217 SMIM35A0A1B0GVV1 85 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 GRM6O15303 877 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 DGKIO75912 1065 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 CCNE2O96020 404 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 STAG3L1P0CL83 205 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 KRT76Q01546 638 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 PAN2Q504Q3 1202 aaKnown RBP17.17■□□□□ 0.34
COL16A1-206ENST00000461217 TMEM31Q5JXX7 168 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 MIS18BP1Q6P0N0 1132 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 NPAS4Q8IUM7 802 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 FAM178BQ8IXR5 827 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 GJD3Q8N144 294 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 NME8Q8N427 588 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 NEK9Q8TD19 979 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 BRF1Q92994 677 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 ZNF689Q96CS4 500 aaPredicted RBP17.17■□□□□ 0.34
COL16A1-206ENST00000461217 TBC1D32Q96NH3 1257 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 C6orf50Q9HD87 102 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 CD320Q9NPF0 282 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 ZNF302Q9NR11 478 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 LRFN2Q9ULH4 789 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 FAM50BQ9Y247 325 aa17.17■□□□□ 0.34
COL16A1-206ENST00000461217 GRXCR2A6NFK2 248 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 FAM86B1E9PN63 330 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 IPO5O00410 1097 aaKnown RBP17.16■□□□□ 0.34
COL16A1-206ENST00000461217 HBP1O60381 514 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 ATG7O95352 703 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 FAM86B2P0C5J1 330 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 KLRC1P26715 233 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 AKAP17AQ02040 695 aaKnown RBP17.16■□□□□ 0.34
COL16A1-206ENST00000461217 NFX1Q12986 1120 aaKnown RBP17.16■□□□□ 0.34
COL16A1-206ENST00000461217 TMEM266Q2M3C6 531 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 PDXDC2PQ6P474 469 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 BLOC1S2Q6QNY1 142 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 CCDC60Q8IWA6 550 aaPredicted RBP17.16■□□□□ 0.34
COL16A1-206ENST00000461217 REXO1Q8N1G1 1221 aaKnown RBP17.16■□□□□ 0.34
COL16A1-206ENST00000461217 ATP8B4Q8TF62 1192 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 KHSRPQ92945 711 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL16A1-206ENST00000461217 CLP1Q92989 425 aaKnown RBP17.16■□□□□ 0.34
COL16A1-206ENST00000461217 ZNF577Q9BSK1 485 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 LRFN3Q9BTN0 628 aa17.16■□□□□ 0.34
COL16A1-206ENST00000461217 COL1A2P08123 1366 aa17.15■□□□□ 0.34
COL16A1-206ENST00000461217 MUC3AQ02505 3323 aa17.15■□□□□ 0.34
COL16A1-206ENST00000461217 IGKV6D-21A0A0A0MT36 114 aa17.15■□□□□ 0.34
COL16A1-206ENST00000461217 ESYT2A0FGR8 921 aa17.15■□□□□ 0.34
COL16A1-206ENST00000461217 FAM86C2PA6NEL3 165 aa17.15■□□□□ 0.34
COL16A1-206ENST00000461217 LINC00271P0C7V0 271 aa17.15■□□□□ 0.34
COL16A1-206ENST00000461217 RBM25P49756 843 aaKnown RBP17.15■□□□□ 0.34
COL16A1-206ENST00000461217 SETQ01105 290 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-206ENST00000461217 MCTP2Q6DN12 878 aa17.15■□□□□ 0.34
COL16A1-206ENST00000461217 SWSAP1Q6NVH7 229 aa17.15■□□□□ 0.34
COL16A1-206ENST00000461217 ABHD15Q6UXT9 468 aa17.15■□□□□ 0.34
COL16A1-206ENST00000461217 TRMT1LQ7Z2T5 733 aaKnown RBP17.15■□□□□ 0.34
COL16A1-206ENST00000461217 RTN4RL1Q86UN2 441 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-206ENST00000461217 CMTR2Q8IYT2 770 aaKnown RBP17.15■□□□□ 0.34
COL16A1-206ENST00000461217 PLVAPQ9BX97 442 aa17.15■□□□□ 0.34
COL16A1-206ENST00000461217 ALG13Q9NP73 1137 aaKnown RBP17.15■□□□□ 0.34
COL16A1-206ENST00000461217 HCN4Q9Y3Q4 1203 aa17.15■□□□□ 0.34
COL16A1-206ENST00000461217 MRPL42Q9Y6G3 142 aaKnown RBP17.15■□□□□ 0.34
COL16A1-206ENST00000461217 KDM3AQ9Y4C1 1321 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms