RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 BCAS3Q9H6U6 928 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 TUFT1Q9NNX1 390 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 LAMA2P24043 3122 aaKnown RBP16.14■□□□□ 0.17
COL5A3-202ENST00000461214 GSTTP1A0A1W2PQM5 241 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 GOLGA6L4A6NEF3 574 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 CTAGE5O15320 804 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 PPFIA4O75335 1185 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 P4HBP07237 508 aaKnown RBP16.14■□□□□ 0.17
COL5A3-202ENST00000461214 RPA1P27694 616 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 HYIQ5T013 277 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 RESP18Q5W5W9 173 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 PCSK9Q8NBP7 692 aaKnown RBP16.14■□□□□ 0.17
COL5A3-202ENST00000461214 SNX29Q8TEQ0 813 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 BADQ92934 168 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 CLIC6Q96NY7 704 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 EIF2AK1Q9BQI3 630 aaKnown RBP16.14■□□□□ 0.17
COL5A3-202ENST00000461214 PYM1Q9BRP8 204 aaKnown RBP16.14■□□□□ 0.17
COL5A3-202ENST00000461214 NT5C3AQ9H0P0 336 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 AZI2Q9H6S1 392 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 ZNF215Q9UL58 517 aaPredicted RBP16.14■□□□□ 0.17
COL5A3-202ENST00000461214 TTC28Q96AY4 2481 aa16.14■□□□□ 0.17
COL5A3-202ENST00000461214 SORBS3O60504 671 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 F2P00734 622 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 LGALS2P05162 132 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 PTGS1P23219 599 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 CMA1P23946 247 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 UBA7P41226 1012 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 QARSP47897 775 aaKnown RBP16.13■□□□□ 0.17
COL5A3-202ENST00000461214 PSMC5P62195 406 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 SHC4Q6S5L8 630 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 PLPPR4Q7Z2D5 763 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 CABP7Q86V35 215 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 CCDC60Q8IWA6 550 aaPredicted RBP16.13■□□□□ 0.17
COL5A3-202ENST00000461214 ARRDC4Q8NCT1 418 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 KLHDC9Q8NEP7 349 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 HSD17B14Q9BPX1 270 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 LXNQ9BS40 222 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 TSEN34Q9BSV6 310 aaKnown RBP16.13■□□□□ 0.17
COL5A3-202ENST00000461214 KATNAL1Q9BW62 490 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 SMARCAD1Q9H4L7 1026 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 ZNF302Q9NR11 478 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 FAM13BQ9NYF5 915 aa16.13■□□□□ 0.17
COL5A3-202ENST00000461214 FAM237AA0A1B0GTK4 181 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 MOXD2PA6NHM9 499 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 PP2D1A8MPX8 630 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 BACH1O14867 736 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 LYPLA2O95372 231 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 PGK1P00558 417 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 CCT6AP40227 531 aaKnown RBP16.12■□□□□ 0.17
COL5A3-202ENST00000461214 UBE2HP62256 183 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 GRIN2CQ14957 1233 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 C4orf19Q8IY42 314 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 MRPS27Q92552 414 aaKnown RBP16.12■□□□□ 0.17
COL5A3-202ENST00000461214 CALML4Q96GE6 196 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 CDK5RAP3Q96JB5 506 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 FAM167AQ96KS9 214 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 MMTAG2Q9BU76 263 aaKnown RBP16.12■□□□□ 0.17
COL5A3-202ENST00000461214 ERAP1Q9NZ08 941 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 CCDC39Q9UFE4 941 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 MAFBQ9Y5Q3 323 aaPredicted RBP16.12■□□□□ 0.17
COL5A3-202ENST00000461214 LTBP2Q14767 1821 aa16.12■□□□□ 0.17
COL5A3-202ENST00000461214 MYADML2A6NDP7 307 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 DDX11L8A8MPP1 907 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 KBTBD13C9JR72 458 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 DNM1LO00429 736 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
COL5A3-202ENST00000461214 STAT5BP51692 787 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 PURAQ00577 322 aaKnown RBP16.11■□□□□ 0.17
COL5A3-202ENST00000461214 CYP4A11Q02928 519 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 LRRC41Q15345 812 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 GNASQ5JWF2 1037 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
COL5A3-202ENST00000461214 BANK1Q8NDB2 785 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 RASSF8Q8NHQ8 419 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 DYDC2Q96IM9 177 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 C16orf70Q9BSU1 422 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 ZSWIM4Q9H7M6 989 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 GABBR1Q9UBS5 961 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 STK17AQ9UEE5 414 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 TELO2Q9Y4R8 837 aa16.11■□□□□ 0.17
COL5A3-202ENST00000461214 POTEB3A0JP26 581 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 MED24O75448 989 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 CABYRO75952 493 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 MYCNP04198 464 aaPredicted RBP16.1■□□□□ 0.17
COL5A3-202ENST00000461214 ZNF286BP0CG31 522 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 SPATA31C1P0DKV0 1188 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 PTMSP20962 102 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 BEX3Q00994 111 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 PRKCEQ02156 737 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 UGCGQ16739 394 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 TMEM119Q4V9L6 283 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 SWSAP1Q6NVH7 229 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 PDXDC2PQ6P474 469 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 POTEBQ6S5H4 581 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 CCDC73Q6ZRK6 1079 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 CATSPER3Q86XQ3 398 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 ADAMTS19Q8TE59 1207 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 GLG1Q92896 1179 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 EPSTI1Q96J88 318 aa16.1■□□□□ 0.17
COL5A3-202ENST00000461214 RNPC3Q96LT9 517 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms