RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 MMP1P03956 469 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 MRPS9P82933 396 aaKnown RBP14.2□□□□□ -0.14
HDAC4-207ENST00000461113 SETQ01105 290 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-207ENST00000461113 GUCY1B3Q02153 619 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 MTMR1Q13613 665 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 CUL4AQ13619 759 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 LAMC2Q13753 1193 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 SMAD2Q15796 467 aaKnown RBP14.2□□□□□ -0.14
HDAC4-207ENST00000461113 EPC2Q52LR7 807 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 CEP55Q53EZ4 464 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 LRRC8DQ7L1W4 858 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 DIS3L2Q8IYB7 885 aaKnown RBP14.2□□□□□ -0.14
HDAC4-207ENST00000461113 FBXO18Q8NFZ0 1043 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 CAGE1Q8TC20 777 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 ATOH1Q92858 354 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-207ENST00000461113 INPP4AQ96PE3 977 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-207ENST00000461113 POP1Q99575 1024 aaKnown RBP14.2□□□□□ -0.14
HDAC4-207ENST00000461113 MXRA8Q9BRK3 442 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 JADE2Q9NQC1 790 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 INSL6Q9Y581 213 aa14.2□□□□□ -0.14
HDAC4-207ENST00000461113 NOP56O00567 594 aaKnown RBP14.19□□□□□ -0.14
HDAC4-207ENST00000461113 MARCH6O60337 910 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 KPNA6O60684 536 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 CYP3A4P08684 503 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 ICAM3P32942 547 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 LTBRP36941 435 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 GPM6BQ13491 265 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 IKBKEQ14164 716 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 LY6KQ17RY6 165 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 LARP1BQ659C4 914 aaKnown RBP14.19□□□□□ -0.14
HDAC4-207ENST00000461113 NIPA1Q7RTP0 329 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 RPAINQ86UA6 219 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 PLA2G4DQ86XP0 818 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 TBCKQ8TEA7 893 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 DHX38Q92620 1227 aaKnown RBP14.19□□□□□ -0.14
HDAC4-207ENST00000461113 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-207ENST00000461113 CTAGE1Q96RT6 745 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 SDF4Q9BRK5 362 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 NSUN3Q9H649 340 aaKnown RBP14.19□□□□□ -0.14
HDAC4-207ENST00000461113 ALG13Q9NP73 1137 aaKnown RBP14.19□□□□□ -0.14
HDAC4-207ENST00000461113 DDX41Q9UJV9 622 aaKnown RBP14.19□□□□□ -0.14
HDAC4-207ENST00000461113 UBIAD1Q9Y5Z9 338 aa14.19□□□□□ -0.14
HDAC4-207ENST00000461113 TRIOO75962 3097 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 SPATA31C2B4DYI2 1134 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 H3BNC9 293 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 EFCAB14O75071 495 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 GCFC2P16383 781 aaKnown RBP14.18□□□□□ -0.14
HDAC4-207ENST00000461113 MCTP1Q6DN14 999 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 CCDC62Q6P9F0 684 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
HDAC4-207ENST00000461113 PIK3AP1Q6ZUJ8 805 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 NEK8Q86SG6 692 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 FBXL6Q8N531 539 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 COPS5Q92905 334 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 SENP7Q9BQF6 1050 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 FOXP1Q9H334 677 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-207ENST00000461113 GJB4Q9NTQ9 266 aa14.18□□□□□ -0.14
HDAC4-207ENST00000461113 NOL7Q9UMY1 257 aaKnown RBP14.18□□□□□ -0.14
HDAC4-207ENST00000461113 TET1Q8NFU7 2136 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 A6NJR5 290 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 BTBD18B2RXH4 712 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 MBTPS2O43462 519 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 PARNO95453 639 aaKnown RBP14.17□□□□□ -0.14
HDAC4-207ENST00000461113 GGPS1O95749 300 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 PDIA4P13667 645 aaKnown RBP14.17□□□□□ -0.14
HDAC4-207ENST00000461113 ITGB5P18084 799 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 CIITAP33076 1130 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 DLX2Q07687 328 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-207ENST00000461113 INF2Q27J81 1249 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 LETM2Q2VYF4 491 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 PRR16Q569H4 304 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 CELF3Q5SZQ8 465 aaKnown RBP14.17□□□□□ -0.14
HDAC4-207ENST00000461113 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-207ENST00000461113 ERMP1Q7Z2K6 904 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 SPATA33Q96N06 139 aa14.17□□□□□ -0.14
HDAC4-207ENST00000461113 DAXXQ9UER7 740 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-207ENST00000461113 TECTAO75443 2155 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 PTPRSQ13332 1948 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 M0R2N6 131 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 MEIS1O00470 390 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 NCK2O43639 380 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 RGS20O76081 388 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 ARIH2O95376 493 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 CKBP12277 381 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 UBA1P22314 1058 aaKnown RBP14.16□□□□□ -0.14
HDAC4-207ENST00000461113 HTRA4P83105 476 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-207ENST00000461113 ZXDAP98168 799 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 NR5A1Q13285 461 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 DGKDQ16760 1214 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 MOXD1Q6UVY6 613 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 METTL7BQ6UX53 244 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 SP7Q8TDD2 431 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-207ENST00000461113 OXER1Q8TDS5 423 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 EMID1Q96A84 441 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-207ENST00000461113 SAMD11Q96NU1 681 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 ZNF577Q9BSK1 485 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 KCNH7Q9NS40 1196 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
HDAC4-207ENST00000461113 CCNT1O60563 726 aaKnown RBP14.15□□□□□ -0.14
HDAC4-207ENST00000461113 BAG4O95429 457 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms