RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 NKX2-4Q9H2Z4 354 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 ZBTB40Q9NUA8 1239 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 MAGEC2Q9UBF1 373 aaPredicted RBP6.01□□□□□ -1.45
SF3A3-202ENST00000460925 FBXL21Q9UKT6 434 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 DDX19BQ9UMR2 479 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 MAPRE3Q9UPY8 281 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 PA2G4Q9UQ80 394 aaKnown RBP6.01□□□□□ -1.45
SF3A3-202ENST00000460925 SLX4Q8IY92 1834 aa6.01□□□□□ -1.45
SF3A3-202ENST00000460925 SH3TC1Q8TE82 1336 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 C10orf71Q711Q0 1435 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 IGF2BP3O00425 579 aaKnown RBP eCLIP6□□□□□ -1.45
SF3A3-202ENST00000460925 DHX15O43143 795 aaKnown RBP6□□□□□ -1.45
SF3A3-202ENST00000460925 SIGLEC6O43699 453 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 EFCAB14O75071 495 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 MYCLP1P12525 358 aaPredicted RBP6□□□□□ -1.45
SF3A3-202ENST00000460925 SOX5P35711 763 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 CTSWP56202 376 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 FOXO4P98177 505 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 C21orf62-AS1Q17RA5 79 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 PARP10Q53GL7 1025 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 GTF2IRD2BQ6EKJ0 949 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 CEP85Q6P2H3 762 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 LMBR1LQ6UX01 489 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 PPP1R42Q7Z4L9 355 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 RNF180Q86T96 592 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 GTF2IRD2Q86UP8 949 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 SKAP1Q86WV1 359 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 CLEC10AQ8IUN9 316 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 SIRT2Q8IXJ6 389 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 FIBCD1Q8N539 461 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 DTWD2Q8NBA8 298 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 ADCY4Q8NFM4 1077 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 ENOX1Q8TC92 643 aaKnown RBP6□□□□□ -1.45
SF3A3-202ENST00000460925 BTN2A2Q8WVV5 523 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 KCTD13Q8WZ19 329 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 C1orf159Q96HA4 380 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 Q96M66 194 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 SSBP4Q9BWG4 385 aaPredicted RBP6□□□□□ -1.45
SF3A3-202ENST00000460925 TRIM39Q9HCM9 518 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 CYP26B1Q9NR63 512 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 DDX56Q9NY93 547 aaKnown RBP6□□□□□ -1.45
SF3A3-202ENST00000460925 KCNH3Q9ULD8 1083 aa6□□□□□ -1.45
SF3A3-202ENST00000460925 TPX2Q9ULW0 747 aaKnown RBP6□□□□□ -1.45
SF3A3-202ENST00000460925 SF3B6Q9Y3B4 125 aaKnown RBP6□□□□□ -1.45
SF3A3-202ENST00000460925 IBTKQ9P2D0 1353 aaPredicted RBP6□□□□□ -1.45
SF3A3-202ENST00000460925 UTYO14607 1347 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 PDE8AO60658 829 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 LRRN2O75325 713 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 KCNH1O95259 989 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 CPP00450 1065 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 IGHDP01880 384 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 GNAI2P04899 355 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 GNAI3P08754 354 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 ZNF865P0CJ78 1059 aaPredicted RBP5.99□□□□□ -1.45
SF3A3-202ENST00000460925 POU3F2P20265 443 aaPredicted RBP5.99□□□□□ -1.45
SF3A3-202ENST00000460925 CHRNA5P30532 468 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 SNW1Q13573 536 aaKnown RBP5.99□□□□□ -1.45
SF3A3-202ENST00000460925 SLC35F1Q5T1Q4 408 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 SFRP5Q5T4F7 317 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 OGFOD3Q6PK18 319 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 NME8Q8N427 588 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 STAG1Q8WVM7 1258 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 GATA6Q92908 595 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 BRF1Q92994 677 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 FAM83CQ9BQN1 747 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 MTFR1LQ9H019 292 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 SIL1Q9H173 461 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 NOL6Q9H6R4 1146 aaKnown RBP5.99□□□□□ -1.45
SF3A3-202ENST00000460925 GREM2Q9H772 168 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 PRDM5Q9NQX1 630 aaPredicted RBP5.99□□□□□ -1.45
SF3A3-202ENST00000460925 GFOD1Q9NXC2 390 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 SFMBT1Q9UHJ3 866 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 ATP8A1Q9Y2Q0 1164 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 LRRC37AA6NMS7 1700 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 CDHR2Q9BYE9 1310 aa5.99□□□□□ -1.45
SF3A3-202ENST00000460925 LEFTY1O75610 366 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 DNAJC8O75937 253 aaPredicted RBP5.98□□□□□ -1.45
SF3A3-202ENST00000460925 ITIH2P19823 946 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 SDSP20132 328 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 ST5P78524 1137 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 TESK1Q15569 626 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 NFKBIBQ15653 356 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 OLFM4Q6UX06 510 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 BEND4Q6ZU67 534 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 MAMDC2Q7Z304 686 aaPredicted RBP5.98□□□□□ -1.45
SF3A3-202ENST00000460925 LRRTM3Q86VH5 581 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 NLGN2Q8NFZ4 835 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 TTLL11Q8NHH1 800 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 SLC7A14Q8TBB6 771 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 PIWIL2Q8TC59 973 aaKnown RBP5.98□□□□□ -1.45
SF3A3-202ENST00000460925 DDX1Q92499 740 aaKnown RBP5.98□□□□□ -1.45
SF3A3-202ENST00000460925 PTPRN2Q92932 1015 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 PUS3Q9BZE2 481 aaKnown RBP5.98□□□□□ -1.45
SF3A3-202ENST00000460925 NYXQ9GZU5 481 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 IRF2BPLQ9H1B7 796 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 GTF2IRD1Q9UHL9 959 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 CCDC88AQ3V6T2 1871 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 RIC1Q4ADV7 1423 aa5.98□□□□□ -1.45
SF3A3-202ENST00000460925 MYH13Q9UKX3 1938 aa5.97□□□□□ -1.45
SF3A3-202ENST00000460925 MYO5AQ9Y4I1 1855 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms