RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 LAMA2P24043 3122 aaKnown RBP23.21■■□□□ 1.31
RPUSD3-210ENST00000460909 TRIOBPQ9H2D6 2365 aa23.2■■□□□ 1.3
RPUSD3-210ENST00000460909 STBD1O95210 358 aa23.2■■□□□ 1.3
RPUSD3-210ENST00000460909 IQCF3P0C7M6 154 aa23.2■■□□□ 1.3
RPUSD3-210ENST00000460909 TXKP42681 527 aa23.2■■□□□ 1.3
RPUSD3-210ENST00000460909 CCDC155Q8N6L0 562 aa23.2■■□□□ 1.3
RPUSD3-210ENST00000460909 TRAPPC12Q8WVT3 735 aa23.2■■□□□ 1.3
RPUSD3-210ENST00000460909 SCLYQ96I15 445 aa23.2■■□□□ 1.3
RPUSD3-210ENST00000460909 TUBE1Q9UJT0 475 aa23.2■■□□□ 1.3
RPUSD3-210ENST00000460909 COL1A2P08123 1366 aa23.19■■□□□ 1.3
RPUSD3-210ENST00000460909 IGBP1P78318 339 aa23.19■■□□□ 1.3
RPUSD3-210ENST00000460909 GPNMBQ14956 572 aa23.19■■□□□ 1.3
RPUSD3-210ENST00000460909 EPHA7Q15375 998 aa23.19■■□□□ 1.3
RPUSD3-210ENST00000460909 RILPL1Q5EBL4 403 aa23.19■■□□□ 1.3
RPUSD3-210ENST00000460909 RUFY4Q6ZNE9 571 aa23.19■■□□□ 1.3
RPUSD3-210ENST00000460909 RETREG2Q8NC44 543 aa23.19■■□□□ 1.3
RPUSD3-210ENST00000460909 ZBTB10Q96DT7 871 aa23.19■■□□□ 1.3
RPUSD3-210ENST00000460909 A0A1W2PPC1 479 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 VPS37CA5D8V6 355 aaPredicted RBP23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 OATP04181 439 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 OR52Z1P0C646 297 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 SELPP16109 830 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 PRKCEQ02156 737 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 PPIGQ13427 754 aaKnown RBP eCLIP23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 ZNF484Q5JVG2 852 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 ZNF618Q5T7W0 954 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 RPAINQ86UA6 219 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 CKAP2LQ8IYA6 745 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 BANK1Q8NDB2 785 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 FAM167AQ96KS9 214 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 IL23AQ9NPF7 189 aa23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.18■■□□□ 1.3
RPUSD3-210ENST00000460909 THPOP40225 353 aa23.17■■□□□ 1.3
RPUSD3-210ENST00000460909 SHHQ15465 462 aa23.17■■□□□ 1.3
RPUSD3-210ENST00000460909 C9orf50Q5SZB4 431 aa23.17■■□□□ 1.3
RPUSD3-210ENST00000460909 NCAPH2Q6IBW4 605 aa23.17■■□□□ 1.3
RPUSD3-210ENST00000460909 TAF2Q6P1X5 1199 aa23.17■■□□□ 1.3
RPUSD3-210ENST00000460909 LRRC8DQ7L1W4 858 aa23.17■■□□□ 1.3
RPUSD3-210ENST00000460909 BRAPQ7Z569 592 aa23.17■■□□□ 1.3
RPUSD3-210ENST00000460909 TDHQ8IZJ6 230 aa23.17■■□□□ 1.3
RPUSD3-210ENST00000460909 WRAP73Q9P2S5 460 aaPredicted RBP23.17■■□□□ 1.3
RPUSD3-210ENST00000460909 MTMR6Q9Y217 621 aa23.17■■□□□ 1.3
RPUSD3-210ENST00000460909 CAND2O75155 1236 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 P4HBP07237 508 aaKnown RBP23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 ACRP10323 421 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 QARSP47897 775 aaKnown RBP23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 PSMC5P62195 406 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 PTGDRQ13258 359 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 MBTPS1Q14703 1052 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 TMEM240Q5SV17 173 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 MTHFD1LQ6UB35 978 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 TRMT1LQ7Z2T5 733 aaKnown RBP23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 FERMT3Q86UX7 667 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 TET1Q8NFU7 2136 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.16■■□□□ 1.38e-7■■■■■ 32.7
RPUSD3-210ENST00000460909 NRBP2Q9NSY0 501 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 RGL1Q9NZL6 768 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 PCDHA2Q9Y5H9 948 aa23.16■■□□□ 1.3
RPUSD3-210ENST00000460909 POTEMA6NI47 508 aa23.15■■□□□ 1.3
RPUSD3-210ENST00000460909 KLRC1P26715 233 aa23.15■■□□□ 1.3
RPUSD3-210ENST00000460909 RFC2P35250 354 aa23.15■■□□□ 1.3
RPUSD3-210ENST00000460909 TARBP2Q15633 366 aaKnown RBP23.15■■□□□ 1.3
RPUSD3-210ENST00000460909 XKR3Q5GH77 459 aa23.15■■□□□ 1.3
RPUSD3-210ENST00000460909 CEP89Q96ST8 783 aa23.15■■□□□ 1.3
RPUSD3-210ENST00000460909 HSD17B14Q9BPX1 270 aa23.15■■□□□ 1.3
RPUSD3-210ENST00000460909 NIFKQ9BYG3 293 aaKnown RBP23.15■■□□□ 1.3
RPUSD3-210ENST00000460909 EVPLQ92817 2033 aa23.15■■□□□ 1.3
RPUSD3-210ENST00000460909 STX6O43752 255 aa23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 SLITRK3O94933 977 aa23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 C22orf31O95567 290 aa23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 TECP42680 631 aa23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 RESTQ13127 1097 aa23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 HABP4Q5JVS0 413 aaKnown RBP23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 FAM26DQ5JW98 314 aa23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 ZNF365Q70YC5 407 aa23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 DNAJB3Q8WWF6 145 aa23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 DYDC2Q96IM9 177 aa23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 EIF2AK1Q9BQI3 630 aaKnown RBP23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 LXNQ9BS40 222 aa23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 CEP131Q9UPN4 1083 aa23.14■■□□□ 1.29
RPUSD3-210ENST00000460909 SIP14410 1827 aa23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 SMIM35A0A1B0GVV1 85 aa23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 TMEM150BA6NC51 233 aa23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 RSPH10B2B2RC85 870 aa23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 RBAK-RBAKDNI3L0D1 243 aa23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 LAD1O00515 517 aa23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 NBNO60934 754 aa23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 PARNO95453 639 aaKnown RBP23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 RSPH10BP0C881 870 aa23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 FXR2P51116 673 aaKnown RBP eCLIP23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 ANO5Q75V66 913 aa23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 C4orf19Q8IY42 314 aa23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 RPUSD2Q8IZ73 545 aaKnown RBP23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 OSBPL7Q9BZF2 842 aa23.13■■□□□ 1.29
RPUSD3-210ENST00000460909 CHRNA1P02708 482 aa23.12■■□□□ 1.29
RPUSD3-210ENST00000460909 CXCL10P02778 98 aa23.12■■□□□ 1.29
RPUSD3-210ENST00000460909 HSP90AA1P07900 732 aaKnown RBP23.12■■□□□ 1.29
RPUSD3-210ENST00000460909 PFKMP08237 780 aa23.12■■□□□ 1.29
RPUSD3-210ENST00000460909 CTSHP09668 335 aa23.12■■□□□ 1.29
RPUSD3-210ENST00000460909 ATP2C1P98194 919 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms