RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 GIT2Q14161 759 aa18.7■□□□□ 0.58
YIPF3-205ENST00000460547 FKBP15Q5T1M5 1219 aa18.7■□□□□ 0.58
YIPF3-205ENST00000460547 PPP4R3CPQ6ZMV5 832 aa18.7■□□□□ 0.58
YIPF3-205ENST00000460547 MTERF4Q7Z6M4 381 aaKnown RBP18.7■□□□□ 0.58
YIPF3-205ENST00000460547 AGBL1Q96MI9 1066 aa18.7■□□□□ 0.58
YIPF3-205ENST00000460547 PPP1R9AQ9ULJ8 1098 aa18.7■□□□□ 0.58
YIPF3-205ENST00000460547 LUC7L2Q9Y383 392 aaKnown RBP18.7■□□□□ 0.58
YIPF3-205ENST00000460547 SMCHD1A6NHR9 2005 aa18.7■□□□□ 0.58
YIPF3-205ENST00000460547 PES1O00541 588 aaKnown RBP18.69■□□□□ 0.58
YIPF3-205ENST00000460547 KRT18P05783 430 aaKnown RBP18.69■□□□□ 0.58
YIPF3-205ENST00000460547 VCAM1P19320 739 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 LRRC41Q15345 812 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 MEA1Q16626 185 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 VWA3BQ502W6 1294 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 HERC4Q5GLZ8 1057 aaPredicted RBP18.69■□□□□ 0.58
YIPF3-205ENST00000460547 FBXO46Q6PJ61 603 aaPredicted RBP18.69■□□□□ 0.58
YIPF3-205ENST00000460547 B3GNT9Q6UX72 402 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 DESI2Q9BSY9 194 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 GAS7O60861 476 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 GNA14O95837 355 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 MARSP56192 900 aaKnown RBP18.69■□□□□ 0.58
YIPF3-205ENST00000460547 PSMC6P62333 389 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 LACTBP83111 547 aaPredicted RBP18.69■□□□□ 0.58
YIPF3-205ENST00000460547 SCFD1Q8WVM8 642 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 MAP7D2Q96T17 732 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 RIT2Q99578 217 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 MXRA8Q9BRK3 442 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 KCTD10Q9H3F6 313 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 MRPL44Q9H9J2 332 aaKnown RBP18.69■□□□□ 0.58
YIPF3-205ENST00000460547 EMILIN3Q9NT22 766 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 DNAI1Q9UI46 699 aa18.69■□□□□ 0.58
YIPF3-205ENST00000460547 NPHP3-ACAD11A0A0J9YXS1 232 aa18.68■□□□□ 0.58
YIPF3-205ENST00000460547 ECM2O94769 699 aaPredicted RBP18.68■□□□□ 0.58
YIPF3-205ENST00000460547 ZBED6P86452 979 aa18.68■□□□□ 0.58
YIPF3-205ENST00000460547 EDRF1Q3B7T1 1238 aa18.68■□□□□ 0.58
YIPF3-205ENST00000460547 EPM2AIP1Q7L775 607 aaPredicted RBP18.68■□□□□ 0.58
YIPF3-205ENST00000460547 NEK9Q8TD19 979 aa18.68■□□□□ 0.58
YIPF3-205ENST00000460547 ANKRD7Q92527 254 aa18.68■□□□□ 0.58
YIPF3-205ENST00000460547 REEP2Q9BRK0 252 aa18.68■□□□□ 0.58
YIPF3-205ENST00000460547 FGFBP2Q9BYJ0 223 aa18.68■□□□□ 0.58
YIPF3-205ENST00000460547 NDST4Q9H3R1 872 aa18.68■□□□□ 0.58
YIPF3-205ENST00000460547 NFIBO00712 420 aa18.67■□□□□ 0.58
YIPF3-205ENST00000460547 SLU7O95391 586 aaKnown RBP18.67■□□□□ 0.58
YIPF3-205ENST00000460547 IRX3P78415 501 aaPredicted RBP18.67■□□□□ 0.58
YIPF3-205ENST00000460547 BMT2Q1RMZ1 405 aa18.67■□□□□ 0.58
YIPF3-205ENST00000460547 ZNF710Q8N1W2 664 aa18.67■□□□□ 0.58
YIPF3-205ENST00000460547 EEF2KMTQ96G04 330 aa18.67■□□□□ 0.58
YIPF3-205ENST00000460547 C12orf42Q96LP6 360 aa18.67■□□□□ 0.58
YIPF3-205ENST00000460547 ZNF577Q9BSK1 485 aa18.67■□□□□ 0.58
YIPF3-205ENST00000460547 TANGO6Q9C0B7 1094 aa18.67■□□□□ 0.58
YIPF3-205ENST00000460547 SIK3Q9Y2K2 1263 aa18.67■□□□□ 0.58
YIPF3-205ENST00000460547 COL4A3BPQ9Y5P4 624 aa18.67■□□□□ 0.58
YIPF3-205ENST00000460547 GAP43P17677 238 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 TRIM21P19474 475 aaKnown RBP18.66■□□□□ 0.58
YIPF3-205ENST00000460547 CYP4A11Q02928 519 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 EPHA7Q15375 998 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 TSC1Q92574 1164 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 TEKT3Q9BXF9 490 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 ASCC2Q9H1I8 757 aaPredicted RBP18.66■□□□□ 0.58
YIPF3-205ENST00000460547 BHMT2Q9H2M3 363 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 OLFML3Q9NRN5 406 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 RGL1Q9NZL6 768 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 COL20A1Q9P218 1284 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 ADGRA2Q96PE1 1338 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 PARP14Q460N5 1801 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 PHIPQ8WWQ0 1821 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 FANCGO15287 622 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 FLOT1O75955 427 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 SLITRK3O94933 977 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 GNRH1P01148 92 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 ARP10275 920 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 PSMC4P43686 418 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 GNG11P61952 73 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 CDK17Q00537 523 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 NCBP1Q09161 790 aaKnown RBP18.66■□□□□ 0.58
YIPF3-205ENST00000460547 TSR1Q2NL82 804 aaKnown RBP18.66■□□□□ 0.58
YIPF3-205ENST00000460547 PCNX4Q63HM2 1172 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 SAMD1Q6SPF0 538 aaPredicted RBP18.66■□□□□ 0.58
YIPF3-205ENST00000460547 RPAP3Q9H6T3 665 aaPredicted RBP18.66■□□□□ 0.58
YIPF3-205ENST00000460547 KCND2Q9NZV8 630 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 PTPN22Q9Y2R2 807 aa18.66■□□□□ 0.58
YIPF3-205ENST00000460547 IPO5O00410 1097 aaKnown RBP18.65■□□□□ 0.58
YIPF3-205ENST00000460547 ZBED4O75132 1171 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 ITGB5P18084 799 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 HOXD10P28358 340 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 HNRNPH3P31942 346 aaKnown RBP18.65■□□□□ 0.58
YIPF3-205ENST00000460547 GCLCP48506 637 aaPredicted RBP18.65■□□□□ 0.58
YIPF3-205ENST00000460547 UBXN2AP68543 259 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 CACNB1Q02641 598 aaPredicted RBP18.65■□□□□ 0.58
YIPF3-205ENST00000460547 SFR1Q86XK3 245 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 ANKRD13CQ8N6S4 541 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 SYTL5Q8TDW5 730 aaPredicted RBP18.65■□□□□ 0.58
YIPF3-205ENST00000460547 DYDC2Q96IM9 177 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 RUSC1Q9BVN2 902 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 EDEM3Q9BZQ6 932 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 ARHGAP39Q9C0H5 1083 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 UNC45AQ9H3U1 944 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 RAVER2Q9HCJ3 691 aaKnown RBP18.65■□□□□ 0.58
YIPF3-205ENST00000460547 ZNF215Q9UL58 517 aaPredicted RBP18.65■□□□□ 0.58
YIPF3-205ENST00000460547 TRAF3IP3Q9Y228 551 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms