RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 MYCT1Q8N699 235 aa19.92■□□□□ 0.78
HPS3-202ENST00000460120 WDR18Q9BV38 432 aa19.92■□□□□ 0.78
HPS3-202ENST00000460120 GANQ9H2C0 597 aa19.92■□□□□ 0.78
HPS3-202ENST00000460120 VAV3Q9UKW4 847 aa19.92■□□□□ 0.78
HPS3-202ENST00000460120 ZBTB12Q9Y330 459 aaPredicted RBP19.92■□□□□ 0.78
HPS3-202ENST00000460120 NR3C1P04150 777 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 MAPK8IP2Q13387 824 aaPredicted RBP19.91■□□□□ 0.78
HPS3-202ENST00000460120 FAM71BQ8TC56 605 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 MBOAT7Q96N66 472 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 TARSL2A2RTX5 802 aaKnown RBP19.91■□□□□ 0.78
HPS3-202ENST00000460120 YDJCA8MPS7 323 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 TCP1P17987 556 aaKnown RBP19.91■□□□□ 0.78
HPS3-202ENST00000460120 MCM3P25205 808 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 STAT2P52630 851 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 Q4G0T1 1027 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 C8orf74Q6P047 294 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 IFT81Q8WYA0 676 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 CALCOCO1Q9P1Z2 691 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 SERPINA10Q9UK55 444 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 SCN9AQ15858 1988 aa19.91■□□□□ 0.78
HPS3-202ENST00000460120 COL11A2P13942 1736 aaPredicted RBP19.91■□□□□ 0.78
HPS3-202ENST00000460120 AFPP02771 609 aaKnown RBP19.9■□□□□ 0.78
HPS3-202ENST00000460120 SLC18A3Q16572 532 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 EXOC3L4Q17RC7 722 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 TBC1D10BQ4KMP7 808 aaPredicted RBP19.9■□□□□ 0.78
HPS3-202ENST00000460120 LRCH2Q5VUJ6 765 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 ZNF571Q7Z3V5 609 aaPredicted RBP19.9■□□□□ 0.78
HPS3-202ENST00000460120 RDH13Q8NBN7 331 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 GMCL1P1Q8NEA9 526 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 GMCL1Q96IK5 515 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 RABEP2Q9H5N1 569 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 FBXO28Q9NVF7 368 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 FRMD3A2A2Y4 597 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 FAM13AO94988 1023 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 UCHL3P15374 230 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 FOXR1Q6PIV2 292 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 SH2D3AQ9BRG2 576 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 NRXN2Q9P2S2 1712 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 SMCHD1A6NHR9 2005 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 ASTN1O14525 1302 aa19.9■□□□□ 0.78
HPS3-202ENST00000460120 TMCO5BA8MYB1 307 aa19.89■□□□□ 0.78
HPS3-202ENST00000460120 PJA2O43164 708 aa19.89■□□□□ 0.78
HPS3-202ENST00000460120 DNAJC21Q5F1R6 531 aaKnown RBP19.89■□□□□ 0.78
HPS3-202ENST00000460120 PITPNM2Q9BZ72 1349 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 SIPA1L1O43166 1804 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 CALUO43852 315 aaPredicted RBP19.89■□□□□ 0.77
HPS3-202ENST00000460120 PON1P27169 355 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 PPARDQ03181 441 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 EDRF1Q3B7T1 1238 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 RBM46Q8TBY0 533 aaKnown RBP19.89■□□□□ 0.77
HPS3-202ENST00000460120 GLIS2Q9BZE0 524 aaPredicted RBP19.89■□□□□ 0.77
HPS3-202ENST00000460120 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.89■□□□□ 0.77
HPS3-202ENST00000460120 GCNT4Q9P109 453 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 FAM184BQ9ULE4 1060 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 CYP2J2P51589 502 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 CC2D2BQ6DHV5 1058 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 RINT1Q6NUQ1 792 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 KLHL7Q8IXQ5 586 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 MMGT1Q8N4V1 131 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 GOLGA6L1Q8N7Z2 621 aa19.89■□□□□ 0.77
HPS3-202ENST00000460120 GOLGA6BA6NDN3 693 aa19.88■□□□□ 0.77
HPS3-202ENST00000460120 FOSP01100 380 aaPredicted RBP19.88■□□□□ 0.77
HPS3-202ENST00000460120 NAB2Q15742 525 aa19.88■□□□□ 0.77
HPS3-202ENST00000460120 FAM20AQ96MK3 541 aa19.88■□□□□ 0.77
HPS3-202ENST00000460120 KRT12Q99456 494 aa19.88■□□□□ 0.77
HPS3-202ENST00000460120 EDEM3Q9BZQ6 932 aa19.88■□□□□ 0.77
HPS3-202ENST00000460120 QSER1Q2KHR3 1735 aa19.88■□□□□ 0.77
HPS3-202ENST00000460120 TRADDQ15628 312 aa19.88■□□□□ 0.77
HPS3-202ENST00000460120 LEKR1Q6ZMV7 388 aa19.88■□□□□ 0.77
HPS3-202ENST00000460120 WRAP73Q9P2S5 460 aaPredicted RBP19.88■□□□□ 0.77
HPS3-202ENST00000460120 ZBTB21Q9ULJ3 1066 aa19.88■□□□□ 0.77
HPS3-202ENST00000460120 GFPT2O94808 682 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 EPB41P11171 864 aaKnown RBP19.87■□□□□ 0.77
HPS3-202ENST00000460120 CFAP221Q4G0U5 840 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 MOXD1Q6UVY6 613 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 BANK1Q8NDB2 785 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 NUCKS1Q9H1E3 243 aaKnown RBP19.87■□□□□ 0.77
HPS3-202ENST00000460120 IGLV3-22A0A075B6J6 115 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 GRID2IPA4D2P6 1211 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 AGPSO00116 658 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 GAS7O60861 476 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 SLITRK3O94933 977 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 GLI1P08151 1106 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 TRIM49P0CI25 452 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 TRIM49CP0CI26 452 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 ARP10275 920 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 GUCY2FP51841 1108 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 MARSP56192 900 aaKnown RBP19.87■□□□□ 0.77
HPS3-202ENST00000460120 GUCY2DQ02846 1103 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 TTC19Q6DKK2 380 aaPredicted RBP19.87■□□□□ 0.77
HPS3-202ENST00000460120 PPP4R3CPQ6ZMV5 832 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 TMEM39BQ9GZU3 492 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 MED4Q9NPJ6 270 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 LUC7LQ9NQ29 371 aaKnown RBP19.87■□□□□ 0.77
HPS3-202ENST00000460120 STIM2Q9P246 746 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 TRAF3IP3Q9Y228 551 aa19.87■□□□□ 0.77
HPS3-202ENST00000460120 KCNK3O14649 394 aa19.86■□□□□ 0.77
HPS3-202ENST00000460120 TBX3O15119 743 aa19.86■□□□□ 0.77
HPS3-202ENST00000460120 EPM2AIP1Q7L775 607 aaPredicted RBP19.86■□□□□ 0.77
HPS3-202ENST00000460120 IRF2BP2Q7Z5L9 587 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms