RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 V9GY48 417 aaPredicted RBP14.1□□□□□ -0.15
GPNMB-204ENST00000459927 NFASCO94856 1347 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 RALGAPA2Q2PPJ7 1873 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 IGKV6D-21A0A0A0MT36 114 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 SMIM35A0A1B0GVV1 85 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 LINC01565O15544 149 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 FOSP01100 380 aaPredicted RBP14.09□□□□□ -0.15
GPNMB-204ENST00000459927 MMP1P03956 469 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 ITGB1P05556 798 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 STAG3L1P0CL83 205 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 KLRC1P26715 233 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 EXOSC10Q01780 885 aaKnown RBP14.09□□□□□ -0.15
GPNMB-204ENST00000459927 CLUL1Q15846 466 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 CEP55Q53EZ4 464 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 TYW1BQ6NUM6 668 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 MTHFD1LQ6UB35 978 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 SYNE3Q6ZMZ3 975 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 FAM43BQ6ZT52 329 aaPredicted RBP14.09□□□□□ -0.15
GPNMB-204ENST00000459927 NPAS4Q8IUM7 802 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 TEX2Q8IWB9 1127 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 CMTR2Q8IYT2 770 aaKnown RBP14.09□□□□□ -0.15
GPNMB-204ENST00000459927 KLHL23Q8NBE8 558 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 SDF4Q9BRK5 362 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 ESYT1Q9BSJ8 1104 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 TMX1Q9H3N1 280 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
GPNMB-204ENST00000459927 TRPC6Q9Y210 931 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 IGSF9BQ9UPX0 1349 aa14.09□□□□□ -0.15
GPNMB-204ENST00000459927 SMCO2A6NFE2 343 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 M0QZ92 97 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 EYA4O95677 639 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 KRT76Q01546 638 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 FUT2Q10981 343 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 ITGB3BPQ13352 177 aaPredicted RBP14.08□□□□□ -0.16
GPNMB-204ENST00000459927 WWC2Q6AWC2 1192 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 ABHD15Q6UXT9 468 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 ALYREFQ86V81 257 aaKnown RBP14.08□□□□□ -0.16
GPNMB-204ENST00000459927 KIAA0319LQ8IZA0 1049 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 MSLNLQ96KJ4 702 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 CDHR5Q9HBB8 845 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 CD207Q9UJ71 328 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 PCDHB7Q9Y5E2 793 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 KDM3AQ9Y4C1 1321 aa14.08□□□□□ -0.16
GPNMB-204ENST00000459927 LOXHD1Q8IVV2 1947 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 HBP1O60381 514 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 SCG2P13521 617 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 SLC26A2P50443 739 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 IRX6P78412 446 aaPredicted RBP14.07□□□□□ -0.16
GPNMB-204ENST00000459927 NFX1Q12986 1120 aaKnown RBP14.07□□□□□ -0.16
GPNMB-204ENST00000459927 PAK2Q13177 524 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 SMAD4Q13485 552 aaKnown RBP14.07□□□□□ -0.16
GPNMB-204ENST00000459927 RNF135Q8IUD6 432 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 POF1BQ8WVV4 589 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 PGBD1Q96JS3 809 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 NEK1Q96PY6 1258 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 CLEC1BQ9P126 229 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 BRPF3Q9ULD4 1205 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 LRFN2Q9ULH4 789 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 MUC6Q6W4X9 2439 aa14.07□□□□□ -0.16
GPNMB-204ENST00000459927 STXBP3O00186 592 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 DHX15O43143 795 aaKnown RBP14.06□□□□□ -0.16
GPNMB-204ENST00000459927 PPFIA3O75145 1194 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 TBX10O75333 385 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 CSPG5O95196 566 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 CCNE2O96020 404 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 ATP4AP20648 1035 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 ZNF76P36508 570 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 CLK2P49760 499 aaKnown RBP14.06□□□□□ -0.16
GPNMB-204ENST00000459927 GATMP50440 423 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 NAPAP54920 295 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 FAM189BP81408 668 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 TMEM266Q2M3C6 531 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 PAN2Q504Q3 1202 aaKnown RBP14.06□□□□□ -0.16
GPNMB-204ENST00000459927 HERC4Q5GLZ8 1057 aaPredicted RBP14.06□□□□□ -0.16
GPNMB-204ENST00000459927 APOA5Q6Q788 366 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 ADGRD2Q7Z7M1 963 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 MICU3Q86XE3 530 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 EFHBQ8N7U6 833 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 POP1Q99575 1024 aaKnown RBP14.06□□□□□ -0.16
GPNMB-204ENST00000459927 KCNH6Q9H252 994 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 RGS18Q9NS28 235 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 FAM217BQ9NTX9 383 aaPredicted RBP14.06□□□□□ -0.16
GPNMB-204ENST00000459927 RBM28Q9NW13 759 aaKnown RBP14.06□□□□□ -0.16
GPNMB-204ENST00000459927 TMEM260Q9NX78 707 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 NOC2LQ9Y3T9 749 aaKnown RBP14.06□□□□□ -0.16
GPNMB-204ENST00000459927 C5orf42Q9H799 3197 aa14.06□□□□□ -0.16
GPNMB-204ENST00000459927 RPS6KA5O75582 802 aa14.05□□□□□ -0.16
GPNMB-204ENST00000459927 SARSP49591 514 aaKnown RBP14.05□□□□□ -0.16
GPNMB-204ENST00000459927 COASYQ13057 564 aa14.05□□□□□ -0.16
GPNMB-204ENST00000459927 TSGA10IPQ3SY00 556 aa14.05□□□□□ -0.16
GPNMB-204ENST00000459927 ZNF484Q5JVG2 852 aa14.05□□□□□ -0.16
GPNMB-204ENST00000459927 FAM102BQ5T8I3 360 aa14.05□□□□□ -0.16
GPNMB-204ENST00000459927 SWSAP1Q6NVH7 229 aa14.05□□□□□ -0.16
GPNMB-204ENST00000459927 HFE2Q6ZVN8 426 aa14.05□□□□□ -0.16
GPNMB-204ENST00000459927 DHX32Q7L7V1 743 aaKnown RBP14.05□□□□□ -0.16
GPNMB-204ENST00000459927 NIPA1Q7RTP0 329 aa14.05□□□□□ -0.16
GPNMB-204ENST00000459927 RBM23Q86U06 439 aaKnown RBP14.05□□□□□ -0.16
GPNMB-204ENST00000459927 MICAL1Q8TDZ2 1067 aa14.05□□□□□ -0.16
GPNMB-204ENST00000459927 EDAQ92838 391 aa14.05□□□□□ -0.16
GPNMB-204ENST00000459927 PPP2R3CQ969Q6 453 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms