RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-223ENST00000459783 PTGDRQ13258 359 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 ORC2Q13416 577 aaPredicted RBP11.55□□□□□ -0.56
MRPL55-223ENST00000459783 EPHA7Q15375 998 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 TCTN1Q2MV58 587 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 C9orf50Q5SZB4 431 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 FAM160B1Q5W0V3 765 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 NCAPH2Q6IBW4 605 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 MFSD5Q6N075 450 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 SLFN12Q8IYM2 578 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 ZNF579Q8NAF0 562 aaKnown RBP11.55□□□□□ -0.56
MRPL55-223ENST00000459783 DYDC2Q96IM9 177 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 HSD17B14Q9BPX1 270 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 SH2D3AQ9BRG2 576 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 NOL7Q9UMY1 257 aaKnown RBP11.55□□□□□ -0.56
MRPL55-223ENST00000459783 NRCAMQ92823 1304 aa11.55□□□□□ -0.56
MRPL55-223ENST00000459783 A0A087WWV3 80 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 HBP1O60381 514 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 SLITRK3O94933 977 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 BAG4O95429 457 aaKnown RBP11.54□□□□□ -0.56
MRPL55-223ENST00000459783 C22orf31O95567 290 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 SPATA31C1P0DKV0 1188 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 CKBP12277 381 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 ATP2C1P98194 919 aaPredicted RBP11.54□□□□□ -0.56
MRPL55-223ENST00000459783 CYP4A11Q02928 519 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 CTTNQ14247 550 aaKnown RBP11.54□□□□□ -0.56
MRPL55-223ENST00000459783 TARBP2Q15633 366 aaKnown RBP11.54□□□□□ -0.56
MRPL55-223ENST00000459783 RILPL1Q5EBL4 403 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 ZNF618Q5T7W0 954 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 FOXD4L5Q5VV16 416 aaPredicted RBP11.54□□□□□ -0.56
MRPL55-223ENST00000459783 ANO5Q75V66 913 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 BRAPQ7Z569 592 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 LINC01465Q8N7H1 131 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 FOXD4L4Q8WXT5 416 aaPredicted RBP11.54□□□□□ -0.56
MRPL55-223ENST00000459783 BBXQ8WY36 941 aaPredicted RBP11.54□□□□□ -0.56
MRPL55-223ENST00000459783 EIF2AK1Q9BQI3 630 aaKnown RBP11.54□□□□□ -0.56
MRPL55-223ENST00000459783 PRKAG2Q9UGJ0 569 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 TUBE1Q9UJT0 475 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 PCDHA12Q9UN75 941 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 NOD1Q9Y239 953 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 ZDHHC9Q9Y397 364 aa11.54□□□□□ -0.56
MRPL55-223ENST00000459783 PP2D1A8MPX8 630 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 PITPNM1O00562 1244 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 MARCH6O60337 910 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 NBNO60934 754 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 MED24O75448 989 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 P4HBP07237 508 aaKnown RBP11.53□□□□□ -0.56
MRPL55-223ENST00000459783 IQCF3P0C7M6 154 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 ACRP10323 421 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 BMP8BP34820 402 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 TECP42680 631 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 FXR2P51116 673 aaKnown RBP eCLIP11.53□□□□□ -0.56
MRPL55-223ENST00000459783 NPEPPSP55786 919 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 PSMC5P62195 406 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 GRIN1Q05586 938 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 MKRN4PQ13434 485 aaPredicted RBP11.53□□□□□ -0.56
MRPL55-223ENST00000459783 PTPAQ15257 358 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 ECM1Q16610 540 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 HABP4Q5JVS0 413 aaKnown RBP11.53□□□□□ -0.56
MRPL55-223ENST00000459783 PLA2G4FQ68DD2 849 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 MTHFD1LQ6UB35 978 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 LRRC8DQ7L1W4 858 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 CAGE1Q8TC20 777 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 LXNQ9BS40 222 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 TCEAL9Q9UHQ7 104 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 CLIC4Q9Y696 253 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 TRIP12Q14669 1992 aaPredicted RBP11.53□□□□□ -0.56
MRPL55-223ENST00000459783 COL1A2P08123 1366 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 TANC1Q9C0D5 1861 aa11.53□□□□□ -0.56
MRPL55-223ENST00000459783 RRN3P2A6NIE6 340 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 CHRNA1P02708 482 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 CTSHP09668 335 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 SELPP16109 830 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 KLRC1P26715 233 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 CDC25AP30304 524 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 THPOP40225 353 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 QARSP47897 775 aaKnown RBP11.52□□□□□ -0.57
MRPL55-223ENST00000459783 FPGSQ05932 587 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 MGAT3Q09327 533 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 DRP2Q13474 957 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 BFSP2Q13515 415 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 SF3A1Q15459 793 aaKnown RBP11.52□□□□□ -0.57
MRPL55-223ENST00000459783 SHHQ15465 462 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 XKR3Q5GH77 459 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 ZNF484Q5JVG2 852 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 TMEM240Q5SV17 173 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 C4orf19Q8IY42 314 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 CKAP2LQ8IYA6 745 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 KIAA0319LQ8IZA0 1049 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 IGSF22Q8N9C0 903 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 DNAJB3Q8WWF6 145 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 CHAMP1Q96JM3 812 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 USP28Q96RU2 1077 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 LBHD1Q9BQE6 289 aaPredicted RBP11.52□□□□□ -0.57
MRPL55-223ENST00000459783 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.52□□□□□ -0.574e-8■■■■□ 26.7
MRPL55-223ENST00000459783 MMTAG2Q9BU76 263 aaKnown RBP11.52□□□□□ -0.57
MRPL55-223ENST00000459783 NIFKQ9BYG3 293 aaKnown RBP11.52□□□□□ -0.57
MRPL55-223ENST00000459783 UBE2OQ9C0C9 1292 aaKnown RBP11.52□□□□□ -0.57
MRPL55-223ENST00000459783 FAM49AQ9H0Q0 323 aaPredicted RBP11.52□□□□□ -0.57
MRPL55-223ENST00000459783 PCDHA2Q9Y5H9 948 aa11.52□□□□□ -0.57
MRPL55-223ENST00000459783 WDR81Q562E7 1941 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms