RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 TXKP42681 527 aa13.84□□□□□ -0.19
C9orf139-201ENST00000457302 ZNF174Q15697 407 aa13.84□□□□□ -0.19
C9orf139-201ENST00000457302 TTC38Q5R3I4 469 aa13.84□□□□□ -0.19
C9orf139-201ENST00000457302 NCAPH2Q6IBW4 605 aa13.84□□□□□ -0.19
C9orf139-201ENST00000457302 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
C9orf139-201ENST00000457302 SNX21Q969T3 373 aa13.84□□□□□ -0.19
C9orf139-201ENST00000457302 INTS4Q96HW7 963 aaKnown RBP13.84□□□□□ -0.19
C9orf139-201ENST00000457302 RNPC3Q96LT9 517 aaKnown RBP13.84□□□□□ -0.19
C9orf139-201ENST00000457302 KCNMB3Q9NPA1 279 aa13.84□□□□□ -0.19
C9orf139-201ENST00000457302 COL1A2P08123 1366 aa13.83□□□□□ -0.19
C9orf139-201ENST00000457302 ZBBXA8MT70 800 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 MAGEB2O15479 319 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 KLRC1P26715 233 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 TMOD1P28289 359 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 PSMC5P62195 406 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 RBL2Q08999 1139 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 PPP2R5CQ13362 524 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 EPHA7Q15375 998 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 TMEM266Q2M3C6 531 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 LRIT3Q3SXY7 679 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 RILPL1Q5EBL4 403 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 XKR3Q5GH77 459 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 TMEM240Q5SV17 173 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 ZNF618Q5T7W0 954 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 IER5Q5VY09 327 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 NME8Q8N427 588 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.83□□□□□ -0.2
C9orf139-201ENST00000457302 WNT8AQ9H1J5 351 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 TTC12Q9H892 705 aaPredicted RBP13.83□□□□□ -0.2
C9orf139-201ENST00000457302 PCDHA2Q9Y5H9 948 aa13.83□□□□□ -0.2
C9orf139-201ENST00000457302 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.82□□□□□ -0.2
C9orf139-201ENST00000457302 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.82□□□□□ -0.2
C9orf139-201ENST00000457302 DDX11L8A8MPP1 907 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 OATP04181 439 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 P4HBP07237 508 aaKnown RBP13.82□□□□□ -0.2
C9orf139-201ENST00000457302 HOXC8P31273 242 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 QARSP47897 775 aaKnown RBP13.82□□□□□ -0.2
C9orf139-201ENST00000457302 ADAM17P78536 824 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 HIC1Q14526 733 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 C9orf50Q5SZB4 431 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 MTHFD1LQ6UB35 978 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 OTUD6AQ7L8S5 288 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 OTOP2Q7RTS6 562 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 EXOC8Q8IYI6 725 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 ERMNQ8TAM6 284 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 DNAJB3Q8WWF6 145 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 DHX38Q92620 1227 aaKnown RBP13.82□□□□□ -0.2
C9orf139-201ENST00000457302 HAS1Q92839 578 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 RAB34Q9BZG1 259 aa13.82□□□□□ -0.2
C9orf139-201ENST00000457302 FAM49AQ9H0Q0 323 aaPredicted RBP13.82□□□□□ -0.2
C9orf139-201ENST00000457302 SCN5AQ14524 2016 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 SMIM35A0A1B0GVV1 85 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 MBLAC1A4D2B0 266 aaPredicted RBP13.81□□□□□ -0.2
C9orf139-201ENST00000457302 VPS37CA5D8V6 355 aaPredicted RBP13.81□□□□□ -0.2
C9orf139-201ENST00000457302 CTSHP09668 335 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 PDIA4P13667 645 aaKnown RBP13.81□□□□□ -0.2
C9orf139-201ENST00000457302 ATP4AP20648 1035 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 KCNJ6P48051 423 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 EPHB4P54760 987 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 IKBKEQ14164 716 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 C16orf59Q7L2K0 433 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 METTL13Q8N6R0 699 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 HERVK_113Q902F9 699 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 CTAGE1Q96RT6 745 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 JPH2Q9BR39 696 aaPredicted RBP13.81□□□□□ -0.2
C9orf139-201ENST00000457302 FOXD4L1Q9NU39 408 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 STK24Q9Y6E0 443 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 SLC4A7Q9Y6M7 1214 aa13.81□□□□□ -0.2
C9orf139-201ENST00000457302 KIF28PB7ZC32 967 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 LAD1O00515 517 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 EFCAB14O75071 495 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 OR52Z1P0C646 297 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 TECP42680 631 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 DNM2P50570 870 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 PRKCEQ02156 737 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 TBC1D8BQ0IIM8 1120 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 TRIM71Q2Q1W2 868 aaKnown RBP13.8□□□□□ -0.2
C9orf139-201ENST00000457302 MARCH8Q5T0T0 291 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 B3GNT9Q6UX72 402 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 RPAINQ86UA6 219 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 TPH2Q8IWU9 490 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 ZNF710Q8N1W2 664 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 BANK1Q8NDB2 785 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 TRAPPC12Q8WVT3 735 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 SEPT8Q92599 483 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 CCDC43Q96MW1 224 aaKnown RBP13.8□□□□□ -0.2
C9orf139-201ENST00000457302 ZSWIM4Q9H7M6 989 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 SEPT9Q9UHD8 586 aaPredicted RBP13.8□□□□□ -0.2
C9orf139-201ENST00000457302 VAV3Q9UKW4 847 aa13.8□□□□□ -0.2
C9orf139-201ENST00000457302 EML1O00423 815 aa13.79□□□□□ -0.2
C9orf139-201ENST00000457302 BAIAP3O94812 1187 aa13.79□□□□□ -0.2
C9orf139-201ENST00000457302 CDC42EP1Q00587 391 aa13.79□□□□□ -0.2
C9orf139-201ENST00000457302 MTERF2Q49AM1 385 aa13.79□□□□□ -0.2
C9orf139-201ENST00000457302 FAM26DQ5JW98 314 aa13.79□□□□□ -0.2
C9orf139-201ENST00000457302 ODR4Q5SWX8 454 aa13.79□□□□□ -0.2
C9orf139-201ENST00000457302 EFCAB12Q6NXP0 572 aa13.79□□□□□ -0.2
C9orf139-201ENST00000457302 CNKSR3Q6P9H4 555 aa13.79□□□□□ -0.2
C9orf139-201ENST00000457302 RUFY4Q6ZNE9 571 aa13.79□□□□□ -0.2
C9orf139-201ENST00000457302 BRAPQ7Z569 592 aa13.79□□□□□ -0.2
C9orf139-201ENST00000457302 NEK9Q8TD19 979 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms