RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 CYFIP2Q96F07 1278 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 CNOT6LQ96LI5 555 aaKnown RBP14.86□□□□□ -0.03
TOP3B-213ENST00000457179 TRIM9Q9C026 710 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 NFU1Q9UMS0 254 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 KIAA1024Q9UPX6 916 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 ADAMTSL1Q8N6G6 1762 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 IGKV6D-41A0A0C4DH26 115 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 NPHP3-ACAD11A0A0J9YXS1 232 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 E9PMD0 336 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 DDX39AO00148 427 aaKnown RBP14.86□□□□□ -0.03
TOP3B-213ENST00000457179 KCNA3P22001 575 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 FECHP22830 423 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 ALS2CLQ60I27 953 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 AP1ARQ63HQ0 302 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 DLK2Q6UY11 383 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 RTKN2Q8IZC4 609 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 SPATA4Q8NEY3 305 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 ZNF483Q8TF39 744 aaPredicted RBP14.86□□□□□ -0.03
TOP3B-213ENST00000457179 RSRC1Q96IZ7 334 aaKnown RBP14.86□□□□□ -0.03
TOP3B-213ENST00000457179 IDI2Q9BXS1 227 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 ITIH6Q6UXX5 1313 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 SCN9AQ15858 1988 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 ZNF233A6NK53 670 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 WNT10BO00744 389 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 BUB1BO60566 1050 aaPredicted RBP14.85□□□□□ -0.03
TOP3B-213ENST00000457179 FAM153BP0C7A2 387 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 MYO1EQ12965 1108 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 ZKSCAN8Q15776 578 aaPredicted RBP14.85□□□□□ -0.03
TOP3B-213ENST00000457179 C11orf91Q3C1V1 193 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 FAM153CQ494X1 144 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 NFRKBQ6P4R8 1299 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 KDM7AQ6ZMT4 941 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 NELFCDQ8IXH7 590 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 EHBP1Q8NDI1 1231 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 ARMC2Q8NEN0 867 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 ZBTB10Q96DT7 871 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 DUSP9Q99956 384 aaKnown RBP14.85□□□□□ -0.03
TOP3B-213ENST00000457179 NOC4LQ9BVI4 516 aaKnown RBP14.85□□□□□ -0.03
TOP3B-213ENST00000457179 SPATS2LQ9NUQ6 558 aaKnown RBP14.85□□□□□ -0.03
TOP3B-213ENST00000457179 KBTBD4Q9NVX7 518 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 STIM2Q9P246 746 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 FAM153AQ9UHL3 310 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 MYH1P12882 1939 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 A6NNZ2 444 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 EPB41P11171 864 aaKnown RBP14.85□□□□□ -0.03
TOP3B-213ENST00000457179 MDH1P40925 334 aaKnown RBP14.85□□□□□ -0.03
TOP3B-213ENST00000457179 RASA3Q14644 834 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 TUBB8Q3ZCM7 444 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 DALRD3Q5D0E6 543 aaKnown RBP14.85□□□□□ -0.03
TOP3B-213ENST00000457179 C8orf74Q6P047 294 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 PARD3BQ8TEW8 1205 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 ZNF526Q8TF50 670 aaPredicted RBP14.85□□□□□ -0.03
TOP3B-213ENST00000457179 OSBPL7Q9BZF2 842 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 TAOK3Q9H2K8 898 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 FAM207AQ9NSI2 230 aaPredicted RBP14.85□□□□□ -0.03
TOP3B-213ENST00000457179 BMP2KQ9NSY1 1161 aaPredicted RBP14.85□□□□□ -0.03
TOP3B-213ENST00000457179 ANKRD31Q8N7Z5 1873 aa14.85□□□□□ -0.03
TOP3B-213ENST00000457179 POTEB3A0JP26 581 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 LGALS16A8MUM7 142 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 POTECB2RU33 542 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 AP1G2O75843 785 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 ECM1Q16610 540 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 TTI2Q6NXR4 508 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 POTEBQ6S5H4 581 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 GIMAP8Q8ND71 665 aaPredicted RBP14.84□□□□□ -0.03
TOP3B-213ENST00000457179 P2RX7Q99572 595 aaKnown RBP14.84□□□□□ -0.03
TOP3B-213ENST00000457179 SH2D3AQ9BRG2 576 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 MMTAG2Q9BU76 263 aaKnown RBP14.84□□□□□ -0.03
TOP3B-213ENST00000457179 AMNQ9BXJ7 453 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 ANO3Q9BYT9 981 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 CCSER1Q9C0I3 900 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 ZNRF3Q9ULT6 936 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 LRRC10BA6NIK2 292 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 FAM107AO95990 144 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 SNHG28P0DPA3 235 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 POLD1P28340 1107 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 VAV2P52735 878 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 KRT83P78385 493 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 PLCB4Q15147 1175 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 SYDE2Q5VT97 1194 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 EMBQ6PCB8 327 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 SV2BQ7L1I2 683 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 CREG2Q8IUH2 290 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 P2RX5Q93086 422 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 CCDC47Q96A33 483 aaKnown RBP14.84□□□□□ -0.03
TOP3B-213ENST00000457179 ATP6V0A4Q9HBG4 840 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 KIAA1551Q9HCM1 1747 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 EIF4E1BA6NMX2 242 aaKnown RBP14.84□□□□□ -0.03
TOP3B-213ENST00000457179 RHOBTB3O94955 611 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 PLEKP08567 350 aaPredicted RBP14.84□□□□□ -0.03
TOP3B-213ENST00000457179 CARSP49589 748 aaKnown RBP14.84□□□□□ -0.03
TOP3B-213ENST00000457179 KRT26Q7Z3Y9 468 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 STAMBPL1Q96FJ0 436 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 ZNF341Q9BYN7 854 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 RIC8AQ9NPQ8 531 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 PRR12Q9ULL5 1215 aa14.84□□□□□ -0.03
TOP3B-213ENST00000457179 POTEFA5A3E0 1075 aa14.83□□□□□ -0.04
TOP3B-213ENST00000457179 POTEIP0CG38 1075 aa14.83□□□□□ -0.04
TOP3B-213ENST00000457179 STAT2P52630 851 aa14.83□□□□□ -0.04
TOP3B-213ENST00000457179 ENOX2Q16206 610 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms