RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 M0QZ92 97 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 CHMP2AO43633 222 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 AMHP03971 560 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 RPLP2P05387 115 aaKnown RBP18.35■□□□□ 0.53
CPSF6-203ENST00000456847 RPAINQ86UA6 219 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 SLC17A8Q8NDX2 589 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 BRMS1Q9HCU9 246 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 PCDHA10Q9Y5I2 948 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 EDIL3O43854 480 aa18.34■□□□□ 0.53
CPSF6-203ENST00000456847 GHRP10912 638 aa18.34■□□□□ 0.53
CPSF6-203ENST00000456847 FOSBP53539 338 aa18.34■□□□□ 0.53
CPSF6-203ENST00000456847 Q4G0T1 1027 aa18.34■□□□□ 0.53
CPSF6-203ENST00000456847 FAM117BQ6P1L5 589 aa18.34■□□□□ 0.53
CPSF6-203ENST00000456847 TRMT1LQ7Z2T5 733 aaKnown RBP18.34■□□□□ 0.53
CPSF6-203ENST00000456847 NSUN7Q8NE18 718 aaKnown RBP18.34■□□□□ 0.53
CPSF6-203ENST00000456847 IFIH1Q9BYX4 1025 aaKnown RBP18.34■□□□□ 0.53
CPSF6-203ENST00000456847 GABBR1Q9UBS5 961 aa18.34■□□□□ 0.53
CPSF6-203ENST00000456847 CDY2AQ9Y6F7 541 aa18.34■□□□□ 0.53
CPSF6-203ENST00000456847 COL1A2P08123 1366 aa18.34■□□□□ 0.53
CPSF6-203ENST00000456847 LOXHD1Q8IVV2 1947 aa18.34■□□□□ 0.53
CPSF6-203ENST00000456847 CHRNA1P02708 482 aa18.33■□□□□ 0.53
CPSF6-203ENST00000456847 MRPS6P82932 125 aaKnown RBP18.33■□□□□ 0.53
CPSF6-203ENST00000456847 LETM2Q2VYF4 491 aa18.33■□□□□ 0.53
CPSF6-203ENST00000456847 MYOCDQ8IZQ8 938 aa18.33■□□□□ 0.53
CPSF6-203ENST00000456847 APBB2Q92870 758 aa18.33■□□□□ 0.53
CPSF6-203ENST00000456847 SLC5A5Q92911 643 aa18.33■□□□□ 0.53
CPSF6-203ENST00000456847 RIT2Q99578 217 aa18.33■□□□□ 0.53
CPSF6-203ENST00000456847 DDX25Q9UHL0 483 aaKnown RBP18.33■□□□□ 0.53
CPSF6-203ENST00000456847 PCDHA2Q9Y5H9 948 aa18.33■□□□□ 0.53
CPSF6-203ENST00000456847 KRT2P35908 639 aa18.33■□□□□ 0.52
CPSF6-203ENST00000456847 MGAT3Q09327 533 aa18.33■□□□□ 0.52
CPSF6-203ENST00000456847 ZNF484Q5JVG2 852 aa18.33■□□□□ 0.52
CPSF6-203ENST00000456847 IER5Q5VY09 327 aa18.33■□□□□ 0.52
CPSF6-203ENST00000456847 MTHFD1LQ6UB35 978 aa18.33■□□□□ 0.52
CPSF6-203ENST00000456847 MOXD1Q6UVY6 613 aa18.33■□□□□ 0.52
CPSF6-203ENST00000456847 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.33■□□□□ 0.525e-9■■■■■ 33.5
CPSF6-203ENST00000456847 PIK3AP1Q6ZUJ8 805 aa18.33■□□□□ 0.52
CPSF6-203ENST00000456847 GJA10Q969M2 543 aa18.33■□□□□ 0.52
CPSF6-203ENST00000456847 OSBPL7Q9BZF2 842 aa18.33■□□□□ 0.52
CPSF6-203ENST00000456847 DISC1Q9NRI5 854 aa18.33■□□□□ 0.52
CPSF6-203ENST00000456847 CYP3A7-CYP3A51PA0A087WV96 503 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 JAK2O60674 1132 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 CYP3A7P24462 503 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 JAK3P52333 1124 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 TMEM62Q0P6H9 643 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 TRIM29Q14134 588 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 NEK8Q86SG6 692 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 OXER1Q8TDS5 423 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 BBXQ8WY36 941 aaPredicted RBP18.32■□□□□ 0.52
CPSF6-203ENST00000456847 UNC45AQ9H3U1 944 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 CERS4Q9HA82 394 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 LIMCH1Q9UPQ0 1083 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 MAFBQ9Y5Q3 323 aaPredicted RBP18.32■□□□□ 0.52
CPSF6-203ENST00000456847 TRPV2Q9Y5S1 764 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 EVPLQ92817 2033 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 IGSF9BQ9UPX0 1349 aa18.32■□□□□ 0.52
CPSF6-203ENST00000456847 MYO9BQ13459 2157 aa18.31■□□□□ 0.52
CPSF6-203ENST00000456847 GJB5O95377 273 aa18.31■□□□□ 0.52
CPSF6-203ENST00000456847 FDPSP14324 419 aaKnown RBP18.31■□□□□ 0.52
CPSF6-203ENST00000456847 IGFBP4P22692 258 aa18.31■□□□□ 0.52
CPSF6-203ENST00000456847 KLRC1P26715 233 aa18.31■□□□□ 0.52
CPSF6-203ENST00000456847 SFNP31947 248 aa18.31■□□□□ 0.52
CPSF6-203ENST00000456847 MIER3Q7Z3K6 550 aa18.31■□□□□ 0.52
CPSF6-203ENST00000456847 FAM167AQ96KS9 214 aa18.31■□□□□ 0.52
CPSF6-203ENST00000456847 SMIM35A0A1B0GVV1 85 aa18.31■□□□□ 0.52
CPSF6-203ENST00000456847 ATP4AP20648 1035 aa18.31■□□□□ 0.52
CPSF6-203ENST00000456847 LPIN1Q14693 890 aa18.31■□□□□ 0.52
CPSF6-203ENST00000456847 CCDC83Q8IWF9 413 aa18.31■□□□□ 0.52
CPSF6-203ENST00000456847 COL4A4P53420 1690 aaPredicted RBP18.3■□□□□ 0.52
CPSF6-203ENST00000456847 GCFC2P16383 781 aaKnown RBP18.3■□□□□ 0.52
CPSF6-203ENST00000456847 TAP1Q03518 808 aa18.3■□□□□ 0.52
CPSF6-203ENST00000456847 FBXO47Q5MNV8 452 aa18.3■□□□□ 0.52
CPSF6-203ENST00000456847 TSHZ1Q6ZSZ6 1077 aa18.3■□□□□ 0.52
CPSF6-203ENST00000456847 MBOAT7Q96N66 472 aa18.3■□□□□ 0.52
CPSF6-203ENST00000456847 RAD9AQ99638 391 aa18.3■□□□□ 0.52
CPSF6-203ENST00000456847 NAP1L4Q99733 375 aaKnown RBP18.3■□□□□ 0.52
CPSF6-203ENST00000456847 CEP131Q9UPN4 1083 aa18.3■□□□□ 0.52
CPSF6-203ENST00000456847 LCHNA4D1U4 455 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 SLC37A4O43826 429 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 MARCH6O60337 910 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 CCNT1O60563 726 aaKnown RBP18.29■□□□□ 0.52
CPSF6-203ENST00000456847 PSMD10O75832 226 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 PRKCEQ02156 737 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 ARNTL2Q8WYA1 636 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 UPF2Q9HAU5 1272 aaKnown RBP18.29■□□□□ 0.52
CPSF6-203ENST00000456847 ARHGEF15O94989 841 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 UPP2O95045 317 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 OATP04181 439 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 ST3GAL1Q11201 340 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 NR5A1Q13285 461 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 NME8Q8N427 588 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 RDM1Q8NG50 284 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 ETNPPLQ8TBG4 499 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 PPM1EQ8WY54 764 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 GINS2Q9Y248 185 aa18.29■□□□□ 0.52
CPSF6-203ENST00000456847 MKRN4PQ13434 485 aaPredicted RBP18.28■□□□□ 0.52
CPSF6-203ENST00000456847 UGCGQ16739 394 aa18.28■□□□□ 0.52
CPSF6-203ENST00000456847 METTL13Q8N6R0 699 aa18.28■□□□□ 0.52
CPSF6-203ENST00000456847 ZSCAN31Q96LW9 406 aaPredicted RBP18.28■□□□□ 0.52
CPSF6-203ENST00000456847 CELF4Q9BZC1 486 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms