RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 CSRNP2Q9H175 543 aa15.79■□□□□ 0.12
TIMP1-205ENST00000456754 LRWD1Q9UFC0 647 aa15.79■□□□□ 0.12
TIMP1-205ENST00000456754 GTF2IRD1Q9UHL9 959 aa15.79■□□□□ 0.12
TIMP1-205ENST00000456754 ZNF215Q9UL58 517 aaPredicted RBP15.79■□□□□ 0.12
TIMP1-205ENST00000456754 ARID2Q68CP9 1835 aa15.79■□□□□ 0.12
TIMP1-205ENST00000456754 EVPLQ92817 2033 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 POTEB3A0JP26 581 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 LAD1O00515 517 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 TREHO43280 583 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 OATP04181 439 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 CYP2C9P11712 490 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 PDIA4P13667 645 aaKnown RBP15.78■□□□□ 0.12
TIMP1-205ENST00000456754 CAPN2P17655 700 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 PSMC5P62195 406 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 FAAP100Q0VG06 881 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 PPFIA1Q13136 1202 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 GRIK4Q16099 956 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 TMEM266Q2M3C6 531 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 ARL6IP4Q66PJ3 421 aaKnown RBP15.78■□□□□ 0.12
TIMP1-205ENST00000456754 NFRKBQ6P4R8 1299 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 POTEBQ6S5H4 581 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 POTEGQ6S5H5 508 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 RUFY4Q6ZNE9 571 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 ATP8B4Q8TF62 1192 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 LRRC15Q8TF66 581 aa15.78■□□□□ 0.12
TIMP1-205ENST00000456754 UMODL1Q5DID0 1318 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 DDX11L8A8MPP1 907 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 SPTLC2O15270 562 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 CD4P01730 458 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 P4HBP07237 508 aaKnown RBP15.77■□□□□ 0.12
TIMP1-205ENST00000456754 SYN1P17600 705 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 ITGB8P26012 769 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 HOXC8P31273 242 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 CCT6AP40227 531 aaKnown RBP15.77■□□□□ 0.12
TIMP1-205ENST00000456754 QARSP47897 775 aaKnown RBP15.77■□□□□ 0.12
TIMP1-205ENST00000456754 RGS19P49795 217 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 NPEPPSP55786 919 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 ZRSR1Q15695 479 aaKnown RBP15.77■□□□□ 0.12
TIMP1-205ENST00000456754 PTGISQ16647 500 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 TPRNQ4KMQ1 711 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 ANO5Q75V66 913 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 KCNK18Q7Z418 384 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 SNX29Q8TEQ0 813 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 PIGOQ8TEQ8 1089 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 DHX38Q92620 1227 aaKnown RBP15.77■□□□□ 0.12
TIMP1-205ENST00000456754 EPSTI1Q96J88 318 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 PNMA5Q96PV4 448 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 BMP2KQ9NSY1 1161 aaPredicted RBP15.77■□□□□ 0.12
TIMP1-205ENST00000456754 SEPT9Q9UHD8 586 aaPredicted RBP15.77■□□□□ 0.12
TIMP1-205ENST00000456754 CEP131Q9UPN4 1083 aa15.77■□□□□ 0.12
TIMP1-205ENST00000456754 C17orf102A2RUQ5 167 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 TRIM43BA6NCK2 446 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 BMP15O95972 392 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 ADAM17P78536 824 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 MTERF2Q49AM1 385 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 C1orf53Q5VUE5 145 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 ANKRD33Q7Z3H0 272 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 SESTD1Q86VW0 696 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 LEO1Q8WVC0 666 aaPredicted RBP15.76■□□□□ 0.11
TIMP1-205ENST00000456754 DPF3Q92784 378 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 ATP6V0A1Q93050 837 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 TRIM43Q96BQ3 446 aaPredicted RBP15.76■□□□□ 0.11
TIMP1-205ENST00000456754 CEP89Q96ST8 783 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 PRDM5Q9NQX1 630 aaPredicted RBP15.76■□□□□ 0.11
TIMP1-205ENST00000456754 PDLIM7Q9NR12 457 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 CHMP5Q9NZZ3 219 aa15.76■□□□□ 0.11
TIMP1-205ENST00000456754 ZMYND8Q9ULU4 1186 aaPredicted RBP15.76■□□□□ 0.11
TIMP1-205ENST00000456754 CIZ1Q9ULV3 898 aaPredicted RBP15.76■□□□□ 0.11
TIMP1-205ENST00000456754 SRPRBQ9Y5M8 271 aaKnown RBP15.76■□□□□ 0.11
TIMP1-205ENST00000456754 YEATS4O95619 227 aa15.75■□□□□ 0.11
TIMP1-205ENST00000456754 GRB10Q13322 594 aa15.75■□□□□ 0.11
TIMP1-205ENST00000456754 PDIA5Q14554 519 aa15.75■□□□□ 0.11
TIMP1-205ENST00000456754 AXDND1Q5T1B0 1012 aaPredicted RBP15.75■□□□□ 0.11
TIMP1-205ENST00000456754 KRI1Q8N9T8 703 aaKnown RBP15.75■□□□□ 0.11
TIMP1-205ENST00000456754 BBXQ8WY36 941 aaPredicted RBP15.75■□□□□ 0.11
TIMP1-205ENST00000456754 SYMPKQ92797 1274 aaKnown RBP15.75■□□□□ 0.11
TIMP1-205ENST00000456754 POLR3CQ9BUI4 534 aaPredicted RBP15.75■□□□□ 0.11
TIMP1-205ENST00000456754 RCOR1Q9UKL0 485 aa15.75■□□□□ 0.11
TIMP1-205ENST00000456754 PCDHA7Q9UN72 937 aa15.75■□□□□ 0.11
TIMP1-205ENST00000456754 SCN5AQ14524 2016 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 SIP14410 1827 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 LTBP2Q14767 1821 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 A0A087X0B3 334 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 HBP1O60381 514 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 EVI5O60447 810 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 RPA1P27694 616 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 YWHABP31946 246 aaKnown RBP15.74■□□□□ 0.11
TIMP1-205ENST00000456754 SLC26A2P50443 739 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 KRT85P78386 507 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 KARSQ15046 597 aaKnown RBP15.74■□□□□ 0.11
TIMP1-205ENST00000456754 TARBP2Q15633 366 aaKnown RBP15.74■□□□□ 0.11
TIMP1-205ENST00000456754 XKR3Q5GH77 459 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 SHC4Q6S5L8 630 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 MTHFD1LQ6UB35 978 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 CABP7Q86V35 215 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 C4orf19Q8IY42 314 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 TNPO1Q92973 898 aaKnown RBP15.74■□□□□ 0.11
TIMP1-205ENST00000456754 HTATIP2Q9BUP3 242 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 OSBPL7Q9BZF2 842 aa15.74■□□□□ 0.11
TIMP1-205ENST00000456754 PPP1R12CQ9BZL4 782 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms