RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 KCNH7Q9NS40 1196 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 SEC63Q9UGP8 760 aaKnown RBP13.64□□□□□ -0.23
LMCD1-206ENST00000456506 CD207Q9UJ71 328 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 PADI3Q9ULW8 664 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 TRPV2Q9Y5S1 764 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 NFASCO94856 1347 aa13.64□□□□□ -0.23
LMCD1-206ENST00000456506 DMDP11532 3685 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 RRN3P2A6NIE6 340 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 ATG7O95352 703 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 RPLP2P05387 115 aaKnown RBP13.63□□□□□ -0.23
LMCD1-206ENST00000456506 MRE11P49959 708 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 GNAQP50148 359 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 IGBP1P78318 339 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 TMEM62Q0P6H9 643 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 FUT2Q10981 343 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 COASYQ13057 564 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 CSPP1Q1MSJ5 1256 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 PLPPR4Q7Z2D5 763 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 EFHBQ8N7U6 833 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 KLHL23Q8NBE8 558 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 SMRP1Q8NCR6 262 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 TMEM87BQ96K49 555 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 MXRA8Q9BRK3 442 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 FTHL17Q9BXU8 183 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 CELF4Q9BZC1 486 aaKnown RBP13.63□□□□□ -0.23
LMCD1-206ENST00000456506 FAM49AQ9H0Q0 323 aaPredicted RBP13.63□□□□□ -0.23
LMCD1-206ENST00000456506 SLC9A2Q9UBY0 812 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 CNTNAP5Q8WYK1 1306 aa13.63□□□□□ -0.23
LMCD1-206ENST00000456506 MYO10Q9HD67 2058 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 LOC730098B7Z3J9 87 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 MGEA5O60502 916 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 ARP10275 920 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 MCM5P33992 734 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 ACTR2P61160 394 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 CBX2Q14781 532 aaPredicted RBP13.62□□□□□ -0.23
LMCD1-206ENST00000456506 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 IER5Q5VY09 327 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 BMP8AQ7Z5Y6 402 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 SGMS1Q86VZ5 419 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 RAB11FIP4Q86YS3 637 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 EDAQ92838 391 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 UIMC1Q96RL1 719 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 POP1Q99575 1024 aaKnown RBP13.62□□□□□ -0.23
LMCD1-206ENST00000456506 UPF3BQ9BZI7 483 aaKnown RBP13.62□□□□□ -0.23
LMCD1-206ENST00000456506 IGFLR1Q9H665 355 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 ERVK-5Q9HDB9 667 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 PCDHGC5Q9Y5F6 944 aa13.62□□□□□ -0.23
LMCD1-206ENST00000456506 SMIM35A0A1B0GVV1 85 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 SPDYE3A6NKU9 549 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 ZBTB42B2RXF5 422 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 STXBP3O00186 592 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 SLC27A2O14975 620 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 CSPG5O95196 566 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 CCNE2O96020 404 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 CALM1P0DP23 149 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 CALM2P0DP24 149 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 CALM3P0DP25 149 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 SCG2P13521 617 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
LMCD1-206ENST00000456506 KCNC3Q14003 757 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 PAN2Q504Q3 1202 aaKnown RBP13.61□□□□□ -0.23
LMCD1-206ENST00000456506 WWC2Q6AWC2 1192 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 CASC1Q6TDU7 716 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 MTHFD1LQ6UB35 978 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 TMTC2Q8N394 836 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 FANCBQ8NB91 859 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 VN1R2Q8NFZ6 395 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 POF1BQ8WVV4 589 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 TMEM40Q8WWA1 233 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 CRYGNQ8WXF5 182 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 CDHR5Q9HBB8 845 aa13.61□□□□□ -0.23
LMCD1-206ENST00000456506 AGO4Q9HCK5 861 aaKnown RBP13.61□□□□□ -0.23
LMCD1-206ENST00000456506 C2orf16Q68DN1 1984 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 CCDC69A6NI79 296 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 MEIS1O00470 390 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 ATP4AP20648 1035 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 STAT5BP51692 787 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 RBM10P98175 930 aaKnown RBP13.6□□□□□ -0.23
LMCD1-206ENST00000456506 PAK2Q13177 524 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 TMEM266Q2M3C6 531 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 CCDC82Q8N4S0 544 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 PRSS33Q8NF86 280 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 ATP8B4Q8TF62 1192 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 RIC8AQ9NPQ8 531 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 HCSTQ9UBK5 93 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
LMCD1-206ENST00000456506 C9IYK1 514 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 ADAMTS3O15072 1205 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 DHX15O43143 795 aaKnown RBP13.59□□□□□ -0.23
LMCD1-206ENST00000456506 NRIP1P48552 1158 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 SARSP49591 514 aaKnown RBP13.59□□□□□ -0.23
LMCD1-206ENST00000456506 NDUFV1P49821 464 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 KRT76Q01546 638 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 CEP55Q53EZ4 464 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 CREB3L3Q68CJ9 461 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 ABHD15Q6UXT9 468 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 HEATR3Q7Z4Q2 680 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 TEX2Q8IWB9 1127 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms