RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 OTUD6AQ7L8S5 288 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF571Q7Z3V5 609 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ANKS1BQ7Z6G8 1248 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF654Q8IZM8 581 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 NUP133Q8WUM0 1156 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 GATA6Q92908 595 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 P2RX7Q99572 595 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 DDX23Q9BUQ8 820 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 FOXP1Q9H334 677 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ARMT1Q9H993 441 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ZFATQ9P243 1243 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 WDR35Q9P2L0 1181 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 FZD1Q9UP38 647 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 CEP131Q9UPN4 1083 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF510Q9Y2H8 683 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 LAMB4A4D0S4 1761 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNFX1Q9P2E3 1918 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 A0A1W2PQC6 194 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 GOLGA8AA7E2F4 631 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 KRT86O43790 486 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 DNAJC8O75937 253 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 SLC9A1P19634 815 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 MTM1Q13496 603 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 RASGRF1Q13972 1273 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 SLC4A8Q2Y0W8 1093 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 KRT71Q3SY84 523 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 GJB7Q6PEY0 223 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 RBM17Q96I25 401 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 CCDC42Q96M95 316 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 SLC4A9Q96Q91 983 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 GREM2Q9H772 168 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ETNK2Q9NVF9 386 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 RWDD2AQ9UIY3 292 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 BLOC1S6Q9UL45 172 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ERICH2A1L162 156 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 GOLGA8KD6RF30 607 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 COQ9O75208 318 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 PPP2R2AP63151 447 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 PTK2Q05397 1052 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 EN1Q05925 392 aaPredicted RBP4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 ACSBG2Q5FVE4 666 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 DAB2IPQ5VWQ8 1189 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 SLC30A9Q6PML9 568 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 IFNL3Q8IZI9 196 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 IP6K1Q92551 441 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 ELMO3Q96BJ8 720 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 CHMP6Q96FZ7 201 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 FAM129AQ9BZQ8 928 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 PRKAG3Q9UGI9 489 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 PHF8Q9UPP1 1060 aa4.96□□□□□ -1.61
DEPDC1-202ENST00000456315 A0A1B0GUA9 196 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 GOLGA6L7A0A1B0GV03 622 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 TRIM75PA6NK02 468 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 SEMA3EO15041 775 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 ORC4O43929 436 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 SORBS2O94875 1100 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 TUBBP07437 444 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 NQO1P15559 274 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 MCM7P33993 719 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 MSH2P43246 934 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 AUHQ13825 339 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 CNGA2Q16280 664 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 DDB1Q16531 1140 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 EXOC3L4Q17RC7 722 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 KIAA0753Q2KHM9 967 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 NFXL1Q6ZNB6 911 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 CSGALNACT2Q8N6G5 542 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 GLIS1Q8NBF1 620 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 USP6NLQ92738 828 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 GPKOWQ92917 476 aaPredicted RBP eCLIP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 SLC35B4Q969S0 331 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 CCDC51Q96ER9 411 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 CNOT6LQ96LI5 555 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 PLEKHG4BQ96PX9 1271 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 PRMT1Q99873 361 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 SPATS2LQ9NUQ6 558 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 TAS2R14Q9NYV8 317 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 PPP1R9AQ9ULJ8 1098 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 AFF2P51816 1311 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 PJA2O43164 708 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 ZCCHC18P0CG32 403 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 TATP17735 454 aaPredicted RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 EPHB2P29323 1055 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 PTDSS1P48651 473 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 ROR2Q01974 943 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 PLCB4Q15147 1175 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 ZCWPW2Q504Y3 356 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 RBM26Q5T8P6 1007 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 CACNA2D3Q8IZS8 1091 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 THEMISQ8N1K5 641 aaPredicted RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 ACTRT1Q8TDG2 376 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 GPATCH3Q96I76 525 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 SRPK1Q96SB4 655 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 TBC1D10AQ9BXI6 508 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 UBAP1Q9NZ09 502 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 TNKSO95271 1327 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 MAP3K15Q6ZN16 1313 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 C2orf71A6NGG8 1288 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 KIAA0391O15091 583 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 AKAP4Q5JQC9 854 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms