RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 MOXD1Q6UVY6 613 aa20.23■□□□□ 0.83
MSH6-207ENST00000456246 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.23■□□□□ 0.83
MSH6-207ENST00000456246 TSHZ1Q6ZSZ6 1077 aa20.23■□□□□ 0.83
MSH6-207ENST00000456246 KRT25Q7Z3Z0 450 aa20.23■□□□□ 0.83
MSH6-207ENST00000456246 TBCKQ8TEA7 893 aa20.23■□□□□ 0.83
MSH6-207ENST00000456246 WASF1Q92558 559 aa20.23■□□□□ 0.83
MSH6-207ENST00000456246 TPCN1Q9ULQ1 816 aa20.23■□□□□ 0.83
MSH6-207ENST00000456246 MAFBQ9Y5Q3 323 aaPredicted RBP20.23■□□□□ 0.83
MSH6-207ENST00000456246 CDY2AQ9Y6F7 541 aa20.23■□□□□ 0.83
MSH6-207ENST00000456246 M0R2N6 131 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 DLL1O00548 723 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 GHRP10912 638 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 SFNP31947 248 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 HTRA4P83105 476 aaPredicted RBP20.22■□□□□ 0.83
MSH6-207ENST00000456246 FBXO47Q5MNV8 452 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 SWSAP1Q6NVH7 229 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 MTHFD1LQ6UB35 978 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 TMCO2Q7Z6W1 182 aaPredicted RBP20.22■□□□□ 0.83
MSH6-207ENST00000456246 BBXQ8WY36 941 aaPredicted RBP20.22■□□□□ 0.83
MSH6-207ENST00000456246 ARNTL2Q8WYA1 636 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 FAM167AQ96KS9 214 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 TGS1Q96RS0 853 aaKnown RBP20.22■□□□□ 0.83
MSH6-207ENST00000456246 CEP131Q9UPN4 1083 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 TRPV2Q9Y5S1 764 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 MYH9P35579 1960 aaKnown RBP20.22■□□□□ 0.83
MSH6-207ENST00000456246 PRUNE2Q8WUY3 3088 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 COL4A6Q14031 1691 aa20.22■□□□□ 0.83
MSH6-207ENST00000456246 CYP3A7-CYP3A51PA0A087WV96 503 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 LCHNA4D1U4 455 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 GAS7O60861 476 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 CYP3A7P24462 503 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 JAK3P52333 1124 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 AK2P54819 239 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 LPIN1Q14693 890 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 NONOQ15233 471 aaKnown RBP eCLIP20.21■□□□□ 0.83
MSH6-207ENST00000456246 Q4G0T1 1027 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 CKAP2LQ8IYA6 745 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 TOP1MTQ969P6 601 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 TEKT3Q9BXF9 490 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 FAM49AQ9H0Q0 323 aaPredicted RBP20.21■□□□□ 0.83
MSH6-207ENST00000456246 TSPYL2Q9H2G4 693 aaPredicted RBP20.21■□□□□ 0.83
MSH6-207ENST00000456246 SAMM50Q9Y512 469 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 KDM3AQ9Y4C1 1321 aa20.21■□□□□ 0.83
MSH6-207ENST00000456246 SIP14410 1827 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 MSH4O15457 936 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 ARHGEF15O94989 841 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 ERVK-21P61565 698 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 NPY5RQ15761 445 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 FAM117BQ6P1L5 589 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 RDM1Q8NG50 284 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 SP7Q8TDD2 431 aaPredicted RBP20.2■□□□□ 0.82
MSH6-207ENST00000456246 SLC5A5Q92911 643 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 SAMD11Q96NU1 681 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 PHF20Q9BVI0 1012 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 FTHL17Q9BXU8 183 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 CERS4Q9HA82 394 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 TRANK1O15050 2925 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 IGSF9BQ9UPX0 1349 aa20.2■□□□□ 0.82
MSH6-207ENST00000456246 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.19■□□□□ 0.82
MSH6-207ENST00000456246 LINC01553A4QN01 128 aa20.19■□□□□ 0.82
MSH6-207ENST00000456246 KLRC1P26715 233 aa20.19■□□□□ 0.82
MSH6-207ENST00000456246 LRCH2Q5VUJ6 765 aa20.19■□□□□ 0.82
MSH6-207ENST00000456246 TRAPPC12Q8WVT3 735 aa20.19■□□□□ 0.82
MSH6-207ENST00000456246 AIFM3Q96NN9 605 aa20.19■□□□□ 0.82
MSH6-207ENST00000456246 YME1L1Q96TA2 773 aa20.19■□□□□ 0.82
MSH6-207ENST00000456246 NAP1L4Q99733 375 aaKnown RBP20.19■□□□□ 0.82
MSH6-207ENST00000456246 CELF4Q9BZC1 486 aaKnown RBP20.19■□□□□ 0.82
MSH6-207ENST00000456246 OSBPL7Q9BZF2 842 aa20.19■□□□□ 0.82
MSH6-207ENST00000456246 DISC1Q9NRI5 854 aa20.19■□□□□ 0.82
MSH6-207ENST00000456246 LMCD1Q9NZU5 365 aa20.19■□□□□ 0.82
MSH6-207ENST00000456246 THEGQ9P2T0 379 aa20.19■□□□□ 0.82
MSH6-207ENST00000456246 GABBR1Q9UBS5 961 aa20.19■□□□□ 0.82
MSH6-207ENST00000456246 CCDC194A0A1B0GVG4 234 aa20.18■□□□□ 0.82
MSH6-207ENST00000456246 EDIL3O43854 480 aa20.18■□□□□ 0.82
MSH6-207ENST00000456246 ODR4Q5SWX8 454 aa20.18■□□□□ 0.82
MSH6-207ENST00000456246 ZNF710Q8N1W2 664 aa20.18■□□□□ 0.82
MSH6-207ENST00000456246 ATXN2LQ8WWM7 1075 aaKnown RBP20.18■□□□□ 0.82
MSH6-207ENST00000456246 PPM1EQ8WY54 764 aa20.18■□□□□ 0.82
MSH6-207ENST00000456246 SYMPKQ92797 1274 aaKnown RBP20.18■□□□□ 0.82
MSH6-207ENST00000456246 MBOAT7Q96N66 472 aa20.18■□□□□ 0.82
MSH6-207ENST00000456246 UIMC1Q96RL1 719 aa20.18■□□□□ 0.82
MSH6-207ENST00000456246 ORC3Q9UBD5 711 aaPredicted RBP20.18■□□□□ 0.82
MSH6-207ENST00000456246 MTCH2Q9Y6C9 303 aa20.18■□□□□ 0.82
MSH6-207ENST00000456246 PRRC2BQ5JSZ5 2229 aaKnown RBP20.17■□□□□ 0.82
MSH6-207ENST00000456246 EPOPA6NHQ4 379 aa20.17■□□□□ 0.82
MSH6-207ENST00000456246 MAGEB2O15479 319 aa20.17■□□□□ 0.82
MSH6-207ENST00000456246 GCFC2P16383 781 aaKnown RBP20.17■□□□□ 0.82
MSH6-207ENST00000456246 ATP4AP20648 1035 aa20.17■□□□□ 0.82
MSH6-207ENST00000456246 NEK4P51957 841 aa20.17■□□□□ 0.82
MSH6-207ENST00000456246 GTF3C6Q969F1 213 aa20.17■□□□□ 0.82
MSH6-207ENST00000456246 ZBTB10Q96DT7 871 aa20.17■□□□□ 0.82
MSH6-207ENST00000456246 BRMS1Q9HCU9 246 aa20.17■□□□□ 0.82
MSH6-207ENST00000456246 KCNJ14Q9UNX9 436 aa20.17■□□□□ 0.82
MSH6-207ENST00000456246 RFXAPO00287 272 aa20.16■□□□□ 0.82
MSH6-207ENST00000456246 PSMD10O75832 226 aa20.16■□□□□ 0.82
MSH6-207ENST00000456246 UPP2O95045 317 aa20.16■□□□□ 0.82
MSH6-207ENST00000456246 TDP2O95551 362 aa20.16■□□□□ 0.82
MSH6-207ENST00000456246 C22orf31O95567 290 aa20.16■□□□□ 0.82
MSH6-207ENST00000456246 OATP04181 439 aa20.16■□□□□ 0.82
MSH6-207ENST00000456246 PAK2Q13177 524 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms