RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 PSMD10O75832 226 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 CD2BP2O95400 341 aaKnown RBP19.6■□□□□ 0.73
USP39-208ENST00000455732 RSPH10BP0C881 870 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 PLCB4Q15147 1175 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 GRIK4Q16099 956 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 TCTN1Q2MV58 587 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 EARS2Q5JPH6 523 aaKnown RBP19.6■□□□□ 0.73
USP39-208ENST00000455732 LRCH2Q5VUJ6 765 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 TAF2Q6P1X5 1199 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 CNKSR3Q6P9H4 555 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 RPAINQ86UA6 219 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 CCDC60Q8IWA6 550 aaPredicted RBP19.6■□□□□ 0.73
USP39-208ENST00000455732 PHOSPHO2Q8TCD6 241 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 MYLIPQ8WY64 445 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 UIMC1Q96RL1 719 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 TEKT3Q9BXF9 490 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 PCDHA11Q9Y5I1 949 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 PCDHA10Q9Y5I2 948 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 VCANP13611 3396 aa19.6■□□□□ 0.73
USP39-208ENST00000455732 RRN3P2A6NIE6 340 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 BTBD18B2RXH4 712 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 BACH1O14867 736 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 SLC37A4O43826 429 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 PSAPP07602 524 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 SFNP31947 248 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 B3GNT9Q6UX72 402 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 RDM1Q8NG50 284 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 MAFAQ8NHW3 353 aaPredicted RBP19.59■□□□□ 0.73
USP39-208ENST00000455732 TMX3Q96JJ7 454 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 C8orf76Q96K31 380 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 NKX2-4Q9H2Z4 354 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 KCNMB3Q9NPA1 279 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 ZNF302Q9NR11 478 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 TUBE1Q9UJT0 475 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 TRPC6Q9Y210 931 aa19.59■□□□□ 0.73
USP39-208ENST00000455732 MAFBQ9Y5Q3 323 aaPredicted RBP19.59■□□□□ 0.73
USP39-208ENST00000455732 IGSF9BQ9UPX0 1349 aa19.58■□□□□ 0.73
USP39-208ENST00000455732 POTEB3A0JP26 581 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 FAM205CA6NFA0 338 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 INSRRP14616 1297 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 MYOGP15173 224 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 JAK3P52333 1124 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 WDR5P61964 334 aaKnown RBP19.58■□□□□ 0.72
USP39-208ENST00000455732 SAFBQ15424 915 aaKnown RBP eCLIP19.58■□□□□ 0.72
USP39-208ENST00000455732 MARCH8Q5T0T0 291 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 PDXDC2PQ6P474 469 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 POTEBQ6S5H4 581 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 FAM184AQ8NB25 1140 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 FBXO18Q8NFZ0 1043 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 ATP8B4Q8TF62 1192 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 FAM20AQ96MK3 541 aa19.58■□□□□ 0.72
USP39-208ENST00000455732 ABHD14A-ACY1A0A1B0GW23 586 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 TBX3O15119 743 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 CCNT1O60563 726 aaKnown RBP19.57■□□□□ 0.72
USP39-208ENST00000455732 RPLP2P05387 115 aaKnown RBP19.57■□□□□ 0.72
USP39-208ENST00000455732 FOSL2P15408 326 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 FOSBP53539 338 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 MKRN4PQ13434 485 aaPredicted RBP19.57■□□□□ 0.72
USP39-208ENST00000455732 FAM26DQ5JW98 314 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 SWSAP1Q6NVH7 229 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 RUFY4Q6ZNE9 571 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 HERC6Q8IVU3 1022 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 OSBPL7Q9BZF2 842 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 UNC45AQ9H3U1 944 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 SLC28A3Q9HAS3 691 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 DISC1Q9NRI5 854 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 COL1A2P08123 1366 aa19.57■□□□□ 0.72
USP39-208ENST00000455732 HBP1O60381 514 aa19.56■□□□□ 0.72
USP39-208ENST00000455732 CTSHP09668 335 aa19.56■□□□□ 0.72
USP39-208ENST00000455732 PLEKHG4Q58EX7 1191 aa19.56■□□□□ 0.72
USP39-208ENST00000455732 DBF4BQ8NFT6 615 aa19.56■□□□□ 0.72
USP39-208ENST00000455732 GJA10Q969M2 543 aa19.56■□□□□ 0.72
USP39-208ENST00000455732 KIF3AQ9Y496 699 aa19.56■□□□□ 0.72
USP39-208ENST00000455732 SAMM50Q9Y512 469 aa19.56■□□□□ 0.72
USP39-208ENST00000455732 EFCAB14O75071 495 aa19.55■□□□□ 0.72
USP39-208ENST00000455732 ATP4AP20648 1035 aa19.55■□□□□ 0.72
USP39-208ENST00000455732 KCNJ6P48051 423 aa19.55■□□□□ 0.72
USP39-208ENST00000455732 DEFB103AP81534 67 aa19.55■□□□□ 0.72
USP39-208ENST00000455732 PPP2R5CQ13362 524 aa19.55■□□□□ 0.72
USP39-208ENST00000455732 IKBKEQ14164 716 aa19.55■□□□□ 0.72
USP39-208ENST00000455732 BBXQ8WY36 941 aaPredicted RBP19.55■□□□□ 0.72
USP39-208ENST00000455732 FAM167AQ96KS9 214 aa19.55■□□□□ 0.72
USP39-208ENST00000455732 FOXP1Q9H334 677 aaPredicted RBP19.55■□□□□ 0.72
USP39-208ENST00000455732 GABBR1Q9UBS5 961 aa19.55■□□□□ 0.72
USP39-208ENST00000455732 VAV3Q9UKW4 847 aa19.55■□□□□ 0.72
USP39-208ENST00000455732 CHMP2AO43633 222 aa19.54■□□□□ 0.72
USP39-208ENST00000455732 CHRNA1P02708 482 aa19.54■□□□□ 0.72
USP39-208ENST00000455732 IGBP1P78318 339 aa19.54■□□□□ 0.72
USP39-208ENST00000455732 GUCY1B3Q02153 619 aa19.54■□□□□ 0.72
USP39-208ENST00000455732 ZNF484Q5JVG2 852 aa19.54■□□□□ 0.72
USP39-208ENST00000455732 RSPH3Q86UC2 560 aa19.54■□□□□ 0.72
USP39-208ENST00000455732 POTEDQ86YR6 584 aa19.54■□□□□ 0.72
USP39-208ENST00000455732 HAS1Q92839 578 aa19.54■□□□□ 0.72
USP39-208ENST00000455732 COL25A1Q9BXS0 654 aaPredicted RBP19.54■□□□□ 0.72
USP39-208ENST00000455732 PCDHA2Q9Y5H9 948 aa19.54■□□□□ 0.72
USP39-208ENST00000455732 ZBTB42B2RXF5 422 aa19.53■□□□□ 0.72
USP39-208ENST00000455732 CA3P07451 260 aa19.53■□□□□ 0.72
USP39-208ENST00000455732 MGAT3Q09327 533 aa19.53■□□□□ 0.72
USP39-208ENST00000455732 PPP2R2DQ66LE6 453 aa19.53■□□□□ 0.72
USP39-208ENST00000455732 MTHFD1LQ6UB35 978 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms