RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 FAM86C2PA6NEL3 165 aa20.08■□□□□ 0.81
CCDC144B-204ENST00000455629 PRR33A8MZF0 331 aa20.08■□□□□ 0.81
CCDC144B-204ENST00000455629 RTN1Q16799 776 aa20.08■□□□□ 0.81
CCDC144B-204ENST00000455629 TYW1BQ6NUM6 668 aa20.08■□□□□ 0.81
CCDC144B-204ENST00000455629 NPAS4Q8IUM7 802 aa20.08■□□□□ 0.81
CCDC144B-204ENST00000455629 CMTR2Q8IYT2 770 aaKnown RBP20.08■□□□□ 0.81
CCDC144B-204ENST00000455629 CRIPAKQ8N1N5 446 aa20.08■□□□□ 0.81
CCDC144B-204ENST00000455629 LINC01599Q8WXQ3 324 aa20.08■□□□□ 0.81
CCDC144B-204ENST00000455629 ZBTB10Q96DT7 871 aa20.08■□□□□ 0.81
CCDC144B-204ENST00000455629 ANO3Q9BYT9 981 aa20.08■□□□□ 0.81
CCDC144B-204ENST00000455629 AGO4Q9HCK5 861 aaKnown RBP20.08■□□□□ 0.81
CCDC144B-204ENST00000455629 LOXHD1Q8IVV2 1947 aa20.08■□□□□ 0.8
CCDC144B-204ENST00000455629 KDM3AQ9Y4C1 1321 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 SMIM35A0A1B0GVV1 85 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 POTEB3A0JP26 581 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 MEIS1O00470 390 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 ZBTB43O43298 467 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 ATG7O95352 703 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 MMP1P03956 469 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 STAG3L1P0CL83 205 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 ARP10275 920 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 LTBRP36941 435 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 EXOSC10Q01780 885 aaKnown RBP20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 ZP2Q05996 745 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 FUT2Q10981 343 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 PAK2Q13177 524 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 ITGB3BPQ13352 177 aaPredicted RBP20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 AP3B2Q13367 1082 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 NAALADL2Q58DX5 795 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 POTEBQ6S5H4 581 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 DHX32Q7L7V1 743 aaKnown RBP20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 P2RX5Q93086 422 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 CELF4Q9BZC1 486 aaKnown RBP20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 PADI3Q9ULW8 664 aa20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 V9GY48 417 aaPredicted RBP20.07■□□□□ 0.8
CCDC144B-204ENST00000455629 SMCO2A6NFE2 343 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 STXBP3O00186 592 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 REC8O95072 547 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 SREBF1P36956 1147 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 TMEM62Q0P6H9 643 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 HYAL1Q12794 435 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 NIPA1Q7RTP0 329 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 RTN4RL1Q86UN2 441 aaPredicted RBP20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 ADHFE1Q8IWW8 467 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 TRAPPC12Q8WVT3 735 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 PGBD1Q96JS3 809 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 BARHL2Q9NY43 387 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 PLAGL2Q9UPG8 496 aa20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 MRPL42Q9Y6G3 142 aaKnown RBP20.06■□□□□ 0.8
CCDC144B-204ENST00000455629 IGKV6D-21A0A0A0MT36 114 aa20.05■□□□□ 0.8
CCDC144B-204ENST00000455629 SCG2P13521 617 aa20.05■□□□□ 0.8
CCDC144B-204ENST00000455629 ZNF76P36508 570 aa20.05■□□□□ 0.8
CCDC144B-204ENST00000455629 RCAN1P53805 252 aa20.05■□□□□ 0.8
CCDC144B-204ENST00000455629 KRT76Q01546 638 aa20.05■□□□□ 0.8
CCDC144B-204ENST00000455629 TSGA10IPQ3SY00 556 aa20.05■□□□□ 0.8
CCDC144B-204ENST00000455629 MTHFD1LQ6UB35 978 aa20.05■□□□□ 0.8
CCDC144B-204ENST00000455629 PPP2R3CQ969Q6 453 aa20.05■□□□□ 0.8
CCDC144B-204ENST00000455629 BRPF3Q9ULD4 1205 aa20.05■□□□□ 0.8
CCDC144B-204ENST00000455629 C19orf67A6NJJ6 358 aa20.04■□□□□ 0.8
CCDC144B-204ENST00000455629 DCXO43602 365 aa20.04■□□□□ 0.8
CCDC144B-204ENST00000455629 HBP1O60381 514 aa20.04■□□□□ 0.8
CCDC144B-204ENST00000455629 HOXD11P31277 338 aaPredicted RBP20.04■□□□□ 0.8
CCDC144B-204ENST00000455629 CLK2P49760 499 aaKnown RBP20.04■□□□□ 0.8
CCDC144B-204ENST00000455629 SMAD2Q15796 467 aaKnown RBP20.04■□□□□ 0.8
CCDC144B-204ENST00000455629 FAM160B1Q5W0V3 765 aa20.04■□□□□ 0.8
CCDC144B-204ENST00000455629 ALG13Q9NP73 1137 aaKnown RBP20.04■□□□□ 0.8
CCDC144B-204ENST00000455629 RNF216Q9NWF9 866 aaPredicted RBP20.04■□□□□ 0.8
CCDC144B-204ENST00000455629 KIAA1671Q9BY89 1806 aa20.04■□□□□ 0.8
CCDC144B-204ENST00000455629 GOLGA8AA7E2F4 631 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 GOLGA8BA8MQT2 603 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 BACH1O14867 736 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 SEC24BO95487 1268 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 CCNE2O96020 404 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 CAMK1Q14012 370 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 KRT32Q14532 448 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 CSPP1Q1MSJ5 1256 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 ABHD15Q6UXT9 468 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 ATP8B4Q8TF62 1192 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 TCEANC2Q96MN5 208 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 POP1Q99575 1024 aaKnown RBP20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 UPF3BQ9BZI7 483 aaKnown RBP20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 TMEM260Q9NX78 707 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 LRFN2Q9ULH4 789 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 COL1A2P08123 1366 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 MUC6Q6W4X9 2439 aa20.03■□□□□ 0.8
CCDC144B-204ENST00000455629 KLF18A0A0U1RQI7 1052 aa20.02■□□□□ 0.8
CCDC144B-204ENST00000455629 EIF5BO60841 1220 aaKnown RBP20.02■□□□□ 0.8
CCDC144B-204ENST00000455629 HMGB1P09429 215 aaKnown RBP20.02■□□□□ 0.8
CCDC144B-204ENST00000455629 KLRC1P26715 233 aa20.02■□□□□ 0.8
CCDC144B-204ENST00000455629 DLX2Q07687 328 aaPredicted RBP20.02■□□□□ 0.8
CCDC144B-204ENST00000455629 SMAD4Q13485 552 aaKnown RBP20.02■□□□□ 0.8
CCDC144B-204ENST00000455629 ODR4Q5SWX8 454 aa20.02■□□□□ 0.8
CCDC144B-204ENST00000455629 SPPL3Q8TCT6 385 aa20.02■□□□□ 0.8
CCDC144B-204ENST00000455629 TMX1Q9H3N1 280 aa20.02■□□□□ 0.8
CCDC144B-204ENST00000455629 C5orf42Q9H799 3197 aa20.01■□□□□ 0.79
CCDC144B-204ENST00000455629 FAM86B1E9PN63 330 aa20.01■□□□□ 0.79
CCDC144B-204ENST00000455629 DDX39AO00148 427 aaKnown RBP20.01■□□□□ 0.79
CCDC144B-204ENST00000455629 MBTPS2O43462 519 aa20.01■□□□□ 0.79
CCDC144B-204ENST00000455629 EPB41L2O43491 1005 aaKnown RBP20.01■□□□□ 0.79
CCDC144B-204ENST00000455629 TBX10O75333 385 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms