RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 MARK1Q9P0L2 795 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 GMIPQ9P107 970 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 JAG2Q9Y219 1238 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 RBM8AQ9Y5S9 174 aaKnown RBP6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 SNX14Q9Y5W7 946 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 SRCAPQ6ZRS2 3230 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 TNKSO95271 1327 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 SCN9AQ15858 1988 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 SLC27A2O14975 620 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 FOXP2O15409 715 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 GHRHP01286 108 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 PYGMP11217 842 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 SNRPBP14678 240 aaKnown RBP6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 NME1P15531 152 aaKnown RBP6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 LIG1P18858 919 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 PRDX5P30044 214 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 NRLP54845 237 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 KIAA2012Q0VF49 1180 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 RABEP1Q15276 862 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 ALX1Q15699 326 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 GRIK5Q16478 980 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 CCDC93Q567U6 631 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 FAM83BQ5T0W9 1011 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 CREB3L3Q68CJ9 461 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 TTLL5Q6EMB2 1281 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 OVOS1Q6IE37 1185 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 NAA16Q6N069 864 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 ERAP2Q6P179 960 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 DHX32Q7L7V1 743 aaKnown RBP6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 NLRC3Q7RTR2 1065 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 PODNQ7Z5L7 613 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 ADGRA1Q86SQ6 560 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 ZGPATQ8N5A5 531 aaKnown RBP6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 TBC1D22AQ8WUA7 517 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 KLHL6Q8WZ60 621 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 BHMTQ93088 406 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 PPP1R14AQ96A00 147 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 NSUN5Q96P11 429 aaKnown RBP6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 ELAC2Q9BQ52 826 aaKnown RBP6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 NUCKS1Q9H1E3 243 aaKnown RBP6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 VPS33BQ9H267 617 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 CLEC4MQ9H2X3 399 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 IFT22Q9H7X7 185 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 ZFATQ9P243 1243 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 NDOR1Q9UHB4 597 aa6.01□□□□□ -1.45
HMGB1P4-201ENST00000455362 FER1L6Q2WGJ9 1857 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 ZNF500O60304 480 aaPredicted RBP6□□□□□ -1.45
HMGB1P4-201ENST00000455362 SNUPNO95149 360 aaKnown RBP6□□□□□ -1.45
HMGB1P4-201ENST00000455362 MBD4O95243 580 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 ASLP04424 464 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 ACRP10323 421 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 MAPTP10636 758 aaKnown RBP6□□□□□ -1.45
HMGB1P4-201ENST00000455362 COL6A1P12109 1028 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 ZKSCAN1P17029 563 aaPredicted RBP6□□□□□ -1.45
HMGB1P4-201ENST00000455362 GNAT2P19087 354 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 POU3F2P20265 443 aaPredicted RBP6□□□□□ -1.45
HMGB1P4-201ENST00000455362 HTR3AP46098 478 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 ZNF143P52747 638 aaPredicted RBP6□□□□□ -1.45
HMGB1P4-201ENST00000455362 GSTO1P78417 241 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 AOC3Q16853 763 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 ALFQ53S48 1182 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 COBLL1Q53SF7 1204 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 MFSD14BQ5SR56 506 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 SCARA3Q6AZY7 606 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 ZNF787Q6DD87 383 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 TPH2Q8IWU9 490 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 LCORLQ8N3X6 602 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 CERS5Q8N5B7 392 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 PDILTQ8N807 584 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 MIGA1Q8NAN2 632 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 VPS37AQ8NEZ2 397 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 OR2W6PQ8NHA6 318 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 STK35Q8TDR2 534 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 USP33Q8TEY7 942 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 SNX21Q969T3 373 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 ATG4CQ96DT6 458 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 TRIM47Q96LD4 638 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 ZFP42Q96MM3 310 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 RIOK1Q9BRS2 568 aaKnown RBP6□□□□□ -1.45
HMGB1P4-201ENST00000455362 TM6SF1Q9BZW5 370 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 MUC3BQ9H195 1237 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 ARMT1Q9H993 441 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 DBNDD1Q9H9R9 158 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6□□□□□ -1.45
HMGB1P4-201ENST00000455362 OSGEPQ9NPF4 335 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 CTNNA3Q9UI47 895 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 TNPO3Q9Y5L0 923 aaKnown RBP6□□□□□ -1.45
HMGB1P4-201ENST00000455362 TAF6LQ9Y6J9 622 aa6□□□□□ -1.45
HMGB1P4-201ENST00000455362 RPAP1Q9BWH6 1393 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P4-201ENST00000455362 ANO9A1A5B4 782 aa5.99□□□□□ -1.45
HMGB1P4-201ENST00000455362 NFKBIEO00221 500 aa5.99□□□□□ -1.45
HMGB1P4-201ENST00000455362 PRODHO43272 600 aa5.99□□□□□ -1.45
HMGB1P4-201ENST00000455362 PPIP5K2O43314 1243 aa5.99□□□□□ -1.45
HMGB1P4-201ENST00000455362 PRKAB2O43741 272 aa5.99□□□□□ -1.45
HMGB1P4-201ENST00000455362 ZEB2O60315 1214 aa5.99□□□□□ -1.45
HMGB1P4-201ENST00000455362 ECE2O60344 883 aa5.99□□□□□ -1.45
HMGB1P4-201ENST00000455362 SMNDC1O75940 238 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P4-201ENST00000455362 APPP05067 770 aa5.99□□□□□ -1.45
HMGB1P4-201ENST00000455362 LDHCP07864 332 aa5.99□□□□□ -1.45
HMGB1P4-201ENST00000455362 CYP21A2P08686 494 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms