RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 HINFPQ9BQA5 517 aa10.51□□□□□ -0.73
LINC01940-201ENST00000455228 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.51□□□□□ -0.73
LINC01940-201ENST00000455228 IL20Q9NYY1 176 aa10.51□□□□□ -0.73
LINC01940-201ENST00000455228 HSFX1Q9UBD0 423 aa10.51□□□□□ -0.73
LINC01940-201ENST00000455228 GDAQ9Y2T3 454 aa10.51□□□□□ -0.73
LINC01940-201ENST00000455228 MACROD2A1Z1Q3 448 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 PDE8AO60658 829 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 IDEP14735 1019 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 ENDOUP21128 410 aaKnown RBP10.5□□□□□ -0.73
LINC01940-201ENST00000455228 CYP7A1P22680 504 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 GGCXP38435 758 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 LSAMPQ13449 338 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 UHMK1Q8TAS1 419 aaKnown RBP10.5□□□□□ -0.73
LINC01940-201ENST00000455228 RNF25Q96BH1 459 aaPredicted RBP10.5□□□□□ -0.73
LINC01940-201ENST00000455228 SQORQ9Y6N5 450 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 MROH5Q6ZUA9 1318 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 LAMB4A4D0S4 1761 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 MST1RQ04912 1400 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 PLEKHA8P1O95397 391 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 PRCPP42785 496 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 CLCN2P51788 898 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 CFAP157Q5JU67 520 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 GSPT2Q8IYD1 628 aaKnown RBP10.5□□□□□ -0.73
LINC01940-201ENST00000455228 WHAMMQ8TF30 809 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 ZNF473Q8WTR7 871 aaKnown RBP10.5□□□□□ -0.73
LINC01940-201ENST00000455228 SREK1Q8WXA9 508 aaKnown RBP10.5□□□□□ -0.73
LINC01940-201ENST00000455228 PTPRN2Q92932 1015 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 SLC12A4Q9UP95 1085 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 MYO1EQ12965 1108 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 MB21D1Q8N884 522 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 CNBD1Q8NA66 436 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 ZSCAN10Q96SZ4 725 aaPredicted RBP10.5□□□□□ -0.73
LINC01940-201ENST00000455228 OSBPL1AQ9BXW6 950 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 SEL1LQ9UBV2 794 aa10.5□□□□□ -0.73
LINC01940-201ENST00000455228 NOSIPQ9Y314 301 aaKnown RBP10.5□□□□□ -0.73
LINC01940-201ENST00000455228 TRIM49BA6NDI0 452 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 USO1O60763 962 aaKnown RBP10.49□□□□□ -0.73
LINC01940-201ENST00000455228 IL2RBP14784 551 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 S100A5P33763 92 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 SCTRP47872 440 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 ATP2C1P98194 919 aaPredicted RBP10.49□□□□□ -0.73
LINC01940-201ENST00000455228 SH2D4BQ5SQS7 431 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 ALDH16A1Q8IZ83 802 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 ZNF280CQ8ND82 737 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 SELENOOQ9BVL4 669 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 NDUFA13Q9P0J0 144 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 REXO2Q9Y3B8 237 aaKnown RBP10.49□□□□□ -0.73
LINC01940-201ENST00000455228 NID2Q14112 1375 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 CFAP73A6NFT4 308 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 PSMA7O14818 248 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 BUB1BO60566 1050 aaPredicted RBP10.49□□□□□ -0.73
LINC01940-201ENST00000455228 PORP16435 677 aaPredicted RBP10.49□□□□□ -0.73
LINC01940-201ENST00000455228 MLH1P40692 756 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 BCAMP50895 628 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 PMS2P54278 862 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 SPA17Q15506 151 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 ENOX2Q16206 610 aaKnown RBP10.49□□□□□ -0.73
LINC01940-201ENST00000455228 CCDC153Q494R4 210 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 FOXB2Q5VYV0 432 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 TTC30BQ8N4P2 665 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 ENAHQ8N8S7 591 aaPredicted RBP10.49□□□□□ -0.73
LINC01940-201ENST00000455228 CCT6BQ92526 530 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 FAM136AQ96C01 138 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 EEF2KMTQ96G04 330 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 METTL14Q9HCE5 456 aaKnown RBP10.49□□□□□ -0.73
LINC01940-201ENST00000455228 DDX60Q8IY21 1712 aaKnown RBP10.49□□□□□ -0.73
LINC01940-201ENST00000455228 AKAP11Q9UKA4 1901 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 LGALS16A8MUM7 142 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 GNGT1P63211 74 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 MRPS25P82663 173 aaKnown RBP10.49□□□□□ -0.73
LINC01940-201ENST00000455228 SEPT2Q15019 361 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 ARHGAP18Q8N392 663 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 TIPINQ9BVW5 301 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 ASAP1Q9ULH1 1129 aa10.49□□□□□ -0.73
LINC01940-201ENST00000455228 ECM29Q5VYK3 1845 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 BAZ2BQ9UIF8 2168 aaKnown RBP10.48□□□□□ -0.73
LINC01940-201ENST00000455228 KANSL1LA0AUZ9 987 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 CYTH3O43739 400 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 AKR1B10O60218 316 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 FLOT1O75955 427 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 CALM1P0DP23 149 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 CALM2P0DP24 149 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 CALM3P0DP25 149 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 MATR3P43243 847 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC01940-201ENST00000455228 CCDC152Q4G0S7 254 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 CCBE1Q6UXH8 406 aaPredicted RBP10.48□□□□□ -0.73
LINC01940-201ENST00000455228 DIS3LQ8TF46 1054 aaKnown RBP10.48□□□□□ -0.73
LINC01940-201ENST00000455228 IFT81Q8WYA0 676 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 PNPLA7Q6ZV29 1317 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 NUP188Q5SRE5 1749 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 MAGEB6P1A0A0J9YX57 407 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 SPDYE5A6NIY4 337 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 ZNF185O15231 689 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 HERVK_113P62684 666 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 PDXDC2PQ6P474 469 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 UBE2Q1Q7Z7E8 422 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 SH3TC2Q8TF17 1288 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 HAUS2Q9NVX0 235 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 UBAP1Q9NZ09 502 aa10.48□□□□□ -0.73
LINC01940-201ENST00000455228 CAPN11Q9UMQ6 739 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms