RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 TCEAL5Q5H9L2 206 aa18.31■□□□□ 0.52
GPC1-206ENST00000455111 IL27Q8NEV9 243 aa18.31■□□□□ 0.52
GPC1-206ENST00000455111 NEK9Q8TD19 979 aa18.31■□□□□ 0.52
GPC1-206ENST00000455111 BRF1Q92994 677 aa18.31■□□□□ 0.52
GPC1-206ENST00000455111 MYH9P35579 1960 aaKnown RBP18.31■□□□□ 0.52
GPC1-206ENST00000455111 C5orf42Q9H799 3197 aa18.31■□□□□ 0.52
GPC1-206ENST00000455111 MYO7AQ13402 2215 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 hCG_1984214I3L0E3 225 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 MGEA5O60502 916 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 DGKIO75912 1065 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 FOSP01100 380 aaPredicted RBP18.3■□□□□ 0.52
GPC1-206ENST00000455111 CYP3A4P08684 503 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 SCG2P13521 617 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 KCNA5P22460 613 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 LTBRP36941 435 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 GATMP50440 423 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 RCAN1P53805 252 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 AP3B2Q13367 1082 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 MTHFD1LQ6UB35 978 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 ZNF713Q8N859 430 aaPredicted RBP18.3■□□□□ 0.52
GPC1-206ENST00000455111 RASGRP4Q8TDF6 673 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 TMEM40Q8WWA1 233 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 CLP1Q92989 425 aaKnown RBP18.3■□□□□ 0.52
GPC1-206ENST00000455111 PHKBQ93100 1093 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 LENG9Q96B70 501 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 IL17RAQ96F46 866 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 JAKMIP1Q96N16 626 aaKnown RBP18.3■□□□□ 0.52
GPC1-206ENST00000455111 SAMD11Q96NU1 681 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 ZMYND12Q9H0C1 365 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 TRPV2Q9Y5S1 764 aa18.3■□□□□ 0.52
GPC1-206ENST00000455111 IGSF9BQ9UPX0 1349 aa18.29■□□□□ 0.52
GPC1-206ENST00000455111 POTEB3A0JP26 581 aa18.29■□□□□ 0.52
GPC1-206ENST00000455111 RRN3P2A6NIE6 340 aa18.29■□□□□ 0.52
GPC1-206ENST00000455111 METAP2P50579 478 aaKnown RBP eCLIP18.29■□□□□ 0.52
GPC1-206ENST00000455111 KRT32Q14532 448 aa18.29■□□□□ 0.52
GPC1-206ENST00000455111 POTEBQ6S5H4 581 aa18.29■□□□□ 0.52
GPC1-206ENST00000455111 NIPA1Q7RTP0 329 aa18.29■□□□□ 0.52
GPC1-206ENST00000455111 BANK1Q8NDB2 785 aa18.29■□□□□ 0.52
GPC1-206ENST00000455111 PADI3Q9ULW8 664 aa18.29■□□□□ 0.52
GPC1-206ENST00000455111 TRPC6Q9Y210 931 aa18.29■□□□□ 0.52
GPC1-206ENST00000455111 KDM3AQ9Y4C1 1321 aa18.28■□□□□ 0.52
GPC1-206ENST00000455111 SMIM35A0A1B0GVV1 85 aa18.28■□□□□ 0.52
GPC1-206ENST00000455111 ESYT2A0FGR8 921 aa18.28■□□□□ 0.52
GPC1-206ENST00000455111 H3BQ06 376 aaPredicted RBP18.28■□□□□ 0.52
GPC1-206ENST00000455111 DNAJB1P25685 340 aa18.28■□□□□ 0.52
GPC1-206ENST00000455111 GTF2F1P35269 517 aaKnown RBP eCLIP18.28■□□□□ 0.52
GPC1-206ENST00000455111 BMPR1AP36894 532 aa18.28■□□□□ 0.52
GPC1-206ENST00000455111 DLX2Q07687 328 aaPredicted RBP18.28■□□□□ 0.52
GPC1-206ENST00000455111 TMEM266Q2M3C6 531 aa18.28■□□□□ 0.52
GPC1-206ENST00000455111 PLA2G4DQ86XP0 818 aa18.28■□□□□ 0.52
GPC1-206ENST00000455111 TEX2Q8IWB9 1127 aa18.28■□□□□ 0.52
GPC1-206ENST00000455111 FBXL16Q8N461 479 aa18.28■□□□□ 0.52
GPC1-206ENST00000455111 FIBCD1Q8N539 461 aa18.28■□□□□ 0.52
GPC1-206ENST00000455111 SDF4Q9BRK5 362 aa18.28■□□□□ 0.52
GPC1-206ENST00000455111 CELF4Q9BZC1 486 aaKnown RBP18.28■□□□□ 0.52
GPC1-206ENST00000455111 MRPL42Q9Y6G3 142 aaKnown RBP18.28■□□□□ 0.52
GPC1-206ENST00000455111 PRPF3O43395 683 aaKnown RBP18.27■□□□□ 0.52
GPC1-206ENST00000455111 RPS6KB1P23443 525 aa18.27■□□□□ 0.52
GPC1-206ENST00000455111 KLRC1P26715 233 aa18.27■□□□□ 0.52
GPC1-206ENST00000455111 CTNNB1P35222 781 aa18.27■□□□□ 0.52
GPC1-206ENST00000455111 RSPH3Q86UC2 560 aa18.27■□□□□ 0.52
GPC1-206ENST00000455111 FAM178BQ8IXR5 827 aa18.27■□□□□ 0.52
GPC1-206ENST00000455111 KIAA0319LQ8IZA0 1049 aa18.27■□□□□ 0.52
GPC1-206ENST00000455111 ATP8B4Q8TF62 1192 aa18.27■□□□□ 0.52
GPC1-206ENST00000455111 AZI2Q9H6S1 392 aa18.27■□□□□ 0.52
GPC1-206ENST00000455111 NCOA5Q9HCD5 579 aaKnown RBP18.27■□□□□ 0.52
GPC1-206ENST00000455111 ERVK-5Q9HDB9 667 aa18.27■□□□□ 0.52
GPC1-206ENST00000455111 NOC2LQ9Y3T9 749 aaKnown RBP18.27■□□□□ 0.52
GPC1-206ENST00000455111 SQORQ9Y6N5 450 aa18.27■□□□□ 0.52
GPC1-206ENST00000455111 GRXCR2A6NFK2 248 aa18.26■□□□□ 0.51
GPC1-206ENST00000455111 EVCP57679 992 aa18.26■□□□□ 0.51
GPC1-206ENST00000455111 HYAL1Q12794 435 aa18.26■□□□□ 0.51
GPC1-206ENST00000455111 TOB2Q14106 344 aaPredicted RBP18.26■□□□□ 0.51
GPC1-206ENST00000455111 CTC1Q2NKJ3 1217 aa18.26■□□□□ 0.51
GPC1-206ENST00000455111 SWSAP1Q6NVH7 229 aa18.26■□□□□ 0.51
GPC1-206ENST00000455111 HCSTQ9UBK5 93 aa18.26■□□□□ 0.51
GPC1-206ENST00000455111 NAP1L2Q9ULW6 460 aaPredicted RBP18.26■□□□□ 0.51
GPC1-206ENST00000455111 IPO5O00410 1097 aaKnown RBP18.25■□□□□ 0.51
GPC1-206ENST00000455111 C22orf31O95567 290 aa18.25■□□□□ 0.51
GPC1-206ENST00000455111 HMGB1P09429 215 aaKnown RBP18.25■□□□□ 0.51
GPC1-206ENST00000455111 CIITAP33076 1130 aa18.25■□□□□ 0.51
GPC1-206ENST00000455111 TIGD5Q53EQ6 642 aa18.25■□□□□ 0.51
GPC1-206ENST00000455111 IER5Q5VY09 327 aa18.25■□□□□ 0.51
GPC1-206ENST00000455111 PTCRAQ6ISU1 281 aaPredicted RBP18.25■□□□□ 0.51
GPC1-206ENST00000455111 BLOC1S2Q6QNY1 142 aa18.25■□□□□ 0.51
GPC1-206ENST00000455111 LINC01465Q8N7H1 131 aa18.25■□□□□ 0.51
GPC1-206ENST00000455111 GJA10Q969M2 543 aa18.25■□□□□ 0.51
GPC1-206ENST00000455111 PABPC5Q96DU9 382 aaKnown RBP18.25■□□□□ 0.51
GPC1-206ENST00000455111 LRFN3Q9BTN0 628 aa18.25■□□□□ 0.51
GPC1-206ENST00000455111 NSUN3Q9H649 340 aaKnown RBP18.25■□□□□ 0.51
GPC1-206ENST00000455111 ALG13Q9NP73 1137 aaKnown RBP18.25■□□□□ 0.51
GPC1-206ENST00000455111 ZNF302Q9NR11 478 aa18.25■□□□□ 0.51
GPC1-206ENST00000455111 MAFBQ9Y5Q3 323 aaPredicted RBP18.25■□□□□ 0.51
GPC1-206ENST00000455111 LINC01565O15544 149 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 HBP1O60381 514 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 CSPG5O95196 566 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 RB1P06400 928 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 PDIA3P30101 505 aaKnown RBP18.24■□□□□ 0.51
GPC1-206ENST00000455111 IRS1P35568 1242 aa18.24■□□□□ 0.51
GPC1-206ENST00000455111 ZNF76P36508 570 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms