RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 UCHL3P15374 230 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 PON1P27169 355 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 LMAN1P49257 510 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 CASP5P51878 434 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 ZNF131P52739 623 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 PSMC6P62333 389 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 RBM26Q5T8P6 1007 aaKnown RBP13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 CCDC181Q5TID7 509 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 KIAA0825Q8IV33 1275 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 C1orf131Q8NDD1 294 aaKnown RBP13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 C7orf43Q8WVR3 580 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 TBC1D5Q92609 795 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 SLC5A5Q92911 643 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 EIF2AK1Q9BQI3 630 aaKnown RBP13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 CRACR2AQ9BSW2 395 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 DBNDD1Q9H9R9 158 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 SIX2Q9NPC8 291 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 TBC1D7Q9P0N9 293 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 DMGDHQ9UI17 866 aaKnown RBP13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 TMEM59LQ9UK28 342 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 MMP10P09238 476 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 MYBP10242 640 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 KLRC1P26715 233 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 TNNT3P45378 269 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 NPEPPSP55786 919 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 APBA1Q02410 837 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 MYBPC2Q14324 1141 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 EXOC3L4Q17RC7 722 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 GRIPAP1Q4V328 841 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 B3GNT9Q6UX72 402 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 GBP6Q6ZN66 633 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 FMNL3Q8IVF7 1028 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 SUPT20HQ8NEM7 779 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 AFAP1L1Q8TED9 768 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 SLC35C1Q96A29 364 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 PRR12Q9ULL5 1215 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 RABGAP1Q9Y3P9 1069 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 FRMPD4Q14CM0 1322 aa13.73□□□□□ -0.21
ECHDC1-209ENST00000454591 GOLGA8KD6RF30 607 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 PALMO75781 387 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 NR3C1P04150 777 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 SLURP2P0DP57 97 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 ZBTB48P10074 688 aaPredicted RBP13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 XRCC5P13010 732 aaKnown RBP13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 EPS15P42566 896 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 GYS2P54840 703 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 MCCD1P59942 119 aaPredicted RBP13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 TCP10Q12799 353 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 PABPC4Q13310 644 aaKnown RBP eCLIP13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 RAPGEF1Q13905 1077 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 SHROOM1Q2M3G4 852 aaPredicted RBP13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 RINT1Q6NUQ1 792 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 C8orf74Q6P047 294 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 LEKR1Q6ZMV7 388 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 C1orf186Q6ZWK4 172 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 OTOP1Q7RTM1 612 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 CNKSR1Q969H4 720 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 PBKQ96KB5 322 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 CALR3Q96L12 384 aaKnown RBP13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 RANBP17Q9H2T7 1088 aaKnown RBP13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 FAM204AQ9H8W3 233 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 EHMT1Q9H9B1 1298 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 DMAC2Q9NW81 257 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 ODF2LQ9ULJ1 636 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 TMX2Q9Y320 296 aa13.72□□□□□ -0.21
ECHDC1-209ENST00000454591 ZMYM2Q9UBW7 1377 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 FAM196BA6NMK8 535 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 A6NNZ2 444 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 TGFB1I1O43294 461 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 OPA1O60313 960 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 TBCAO75347 108 aaKnown RBP13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 AKAP3O75969 853 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 JAG1P78504 1218 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 EZH2Q15910 746 aaKnown RBP13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 KIAA0753Q2KHM9 967 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 TUBB8Q3ZCM7 444 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 EMC10Q5UCC4 262 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 ZNF571Q7Z3V5 609 aaPredicted RBP13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 SLFN11Q7Z7L1 901 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 SLC9A9Q8IVB4 645 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 CD302Q8IX05 232 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 IFT20Q8IY31 132 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 FAM133AQ8N9E0 248 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 LRRC57Q8N9N7 239 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 NEK9Q8TD19 979 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 RUSC1Q9BVN2 902 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 TSPYL1Q9H0U9 437 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 ARHGEF10LQ9HCE6 1279 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 RBM12Q9NTZ6 932 aaKnown RBP13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 PCDHAC2Q9Y5I4 1007 aa13.71□□□□□ -0.21
ECHDC1-209ENST00000454591 A0A0U1RQG5 324 aaPredicted RBP13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 A0A1W2PRG0 241 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 GOLGA6BA6NDN3 693 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 H0YIN7 160 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 EML1O00423 815 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 NCK2O43639 380 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 FLOT1O75955 427 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 GH2P01242 217 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 FERP16591 822 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 CAPN2P17655 700 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms