RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 BBXQ8WY36 941 aaPredicted RBP15.98■□□□□ 0.15
HDAC4-205ENST00000454542 INTS4Q96HW7 963 aaKnown RBP15.98■□□□□ 0.15
HDAC4-205ENST00000454542 FAM167AQ96KS9 214 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 MTMR9Q96QG7 549 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 GABBR1Q9UBS5 961 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 TRPC6Q9Y210 931 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 ARID2Q68CP9 1835 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 EML1O00423 815 aa15.97■□□□□ 0.15
HDAC4-205ENST00000454542 MGAT3Q09327 533 aa15.97■□□□□ 0.15
HDAC4-205ENST00000454542 FAM26DQ5JW98 314 aa15.97■□□□□ 0.15
HDAC4-205ENST00000454542 ZNF618Q5T7W0 954 aa15.97■□□□□ 0.15
HDAC4-205ENST00000454542 RUFY4Q6ZNE9 571 aa15.97■□□□□ 0.15
HDAC4-205ENST00000454542 MIER3Q7Z3K6 550 aa15.97■□□□□ 0.15
HDAC4-205ENST00000454542 RETREG2Q8NC44 543 aa15.97■□□□□ 0.15
HDAC4-205ENST00000454542 HERVK_113Q902F9 699 aa15.97■□□□□ 0.15
HDAC4-205ENST00000454542 TNPO1Q92973 898 aaKnown RBP15.97■□□□□ 0.15
HDAC4-205ENST00000454542 TMEM60Q9H2L4 133 aa15.97■□□□□ 0.15
HDAC4-205ENST00000454542 PTPRSQ13332 1948 aa15.97■□□□□ 0.15
HDAC4-205ENST00000454542 SOX1O00570 391 aaPredicted RBP15.96■□□□□ 0.15
HDAC4-205ENST00000454542 NBNO60934 754 aa15.96■□□□□ 0.15
HDAC4-205ENST00000454542 STBD1O95210 358 aa15.96■□□□□ 0.15
HDAC4-205ENST00000454542 OATP04181 439 aa15.96■□□□□ 0.15
HDAC4-205ENST00000454542 RPLP2P05387 115 aaKnown RBP15.96■□□□□ 0.15
HDAC4-205ENST00000454542 ACRP10323 421 aa15.96■□□□□ 0.15
HDAC4-205ENST00000454542 PRKCEQ02156 737 aa15.96■□□□□ 0.15
HDAC4-205ENST00000454542 CALCRLQ16602 461 aa15.96■□□□□ 0.15
HDAC4-205ENST00000454542 ZNF484Q5JVG2 852 aa15.96■□□□□ 0.15
HDAC4-205ENST00000454542 ZNF365Q70YC5 407 aa15.96■□□□□ 0.15
HDAC4-205ENST00000454542 RPUSD2Q8IZ73 545 aaKnown RBP15.96■□□□□ 0.15
HDAC4-205ENST00000454542 TRAPPC12Q8WVT3 735 aa15.96■□□□□ 0.15
HDAC4-205ENST00000454542 SAMM50Q9Y512 469 aa15.96■□□□□ 0.15
HDAC4-205ENST00000454542 PCDHA2Q9Y5H9 948 aa15.96■□□□□ 0.15
HDAC4-205ENST00000454542 C22orf31O95567 290 aa15.95■□□□□ 0.14
HDAC4-205ENST00000454542 THPOP40225 353 aa15.95■□□□□ 0.14
HDAC4-205ENST00000454542 TOB1P50616 345 aaPredicted RBP15.95■□□□□ 0.14
HDAC4-205ENST00000454542 MKRN4PQ13434 485 aaPredicted RBP15.95■□□□□ 0.14
HDAC4-205ENST00000454542 TTC38Q5R3I4 469 aa15.95■□□□□ 0.14
HDAC4-205ENST00000454542 LINC01465Q8N7H1 131 aa15.95■□□□□ 0.14
HDAC4-205ENST00000454542 RNPC3Q96LT9 517 aaKnown RBP15.95■□□□□ 0.14
HDAC4-205ENST00000454542 MICAL3Q7RTP6 2002 aa15.95■□□□□ 0.14
HDAC4-205ENST00000454542 SZT2Q5T011 3432 aa15.95■□□□□ 0.14
HDAC4-205ENST00000454542 LAMA2P24043 3122 aaKnown RBP15.94■□□□□ 0.14
HDAC4-205ENST00000454542 SMIM35A0A1B0GVV1 85 aa15.94■□□□□ 0.14
HDAC4-205ENST00000454542 BAG4O95429 457 aaKnown RBP15.94■□□□□ 0.14
HDAC4-205ENST00000454542 MCM7P33993 719 aa15.94■□□□□ 0.14
HDAC4-205ENST00000454542 IGBP1P78318 339 aa15.94■□□□□ 0.14
HDAC4-205ENST00000454542 GNL2Q13823 731 aaKnown RBP15.94■□□□□ 0.14
HDAC4-205ENST00000454542 EPHA7Q15375 998 aa15.94■□□□□ 0.14
HDAC4-205ENST00000454542 TARBP2Q15633 366 aaKnown RBP15.94■□□□□ 0.14
HDAC4-205ENST00000454542 MTHFD1LQ6UB35 978 aa15.94■□□□□ 0.14
HDAC4-205ENST00000454542 C4orf32Q8N8J7 132 aa15.94■□□□□ 0.14
HDAC4-205ENST00000454542 ZBTB10Q96DT7 871 aa15.94■□□□□ 0.14
HDAC4-205ENST00000454542 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
HDAC4-205ENST00000454542 NOL7Q9UMY1 257 aaKnown RBP15.94■□□□□ 0.14
HDAC4-205ENST00000454542 CEP131Q9UPN4 1083 aa15.94■□□□□ 0.14
HDAC4-205ENST00000454542 RSPH10B2B2RC85 870 aa15.93■□□□□ 0.14
HDAC4-205ENST00000454542 OR52Z1P0C646 297 aa15.93■□□□□ 0.14
HDAC4-205ENST00000454542 RSPH10BP0C881 870 aa15.93■□□□□ 0.14
HDAC4-205ENST00000454542 PSMC5P62195 406 aa15.93■□□□□ 0.14
HDAC4-205ENST00000454542 NBR1Q14596 966 aa15.93■□□□□ 0.14
HDAC4-205ENST00000454542 XKR3Q5GH77 459 aa15.93■□□□□ 0.14
HDAC4-205ENST00000454542 NEK9Q8TD19 979 aa15.93■□□□□ 0.14
HDAC4-205ENST00000454542 NIFKQ9BYG3 293 aaKnown RBP15.93■□□□□ 0.14
HDAC4-205ENST00000454542 TTC12Q9H892 705 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-205ENST00000454542 CXXC1Q9P0U4 656 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-205ENST00000454542 WRAP73Q9P2S5 460 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-205ENST00000454542 GBF1Q92538 1859 aa15.93■□□□□ 0.14
HDAC4-205ENST00000454542 KDM3AQ9Y4C1 1321 aa15.93■□□□□ 0.14
HDAC4-205ENST00000454542 H3BQV1 296 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 BAIAP3O94812 1187 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 FGBP02675 491 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 P4HBP07237 508 aaKnown RBP15.92■□□□□ 0.14
HDAC4-205ENST00000454542 CTSHP09668 335 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 QARSP47897 775 aaKnown RBP15.92■□□□□ 0.14
HDAC4-205ENST00000454542 SMAD3P84022 425 aaKnown RBP15.92■□□□□ 0.14
HDAC4-205ENST00000454542 TCTN1Q2MV58 587 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 PLEKHG4Q58EX7 1191 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 LARP1BQ659C4 914 aaKnown RBP15.92■□□□□ 0.14
HDAC4-205ENST00000454542 GPR153Q6NV75 609 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 CNKSR3Q6P9H4 555 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 DEFB128Q7Z7B8 93 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 CKAP2LQ8IYA6 745 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 BANK1Q8NDB2 785 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 DNAJB3Q8WWF6 145 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 LXNQ9BS40 222 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 OSBPL7Q9BZF2 842 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.92■□□□□ 0.14
HDAC4-205ENST00000454542 MYH15Q9Y2K3 1946 aa15.92■□□□□ 0.14
HDAC4-205ENST00000454542 EVPLQ92817 2033 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 POTEMA6NI47 508 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 LYPLA2O95372 231 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 CHRNA1P02708 482 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 ATP2B1P20020 1258 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 PDCP20941 246 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 KLRC1P26715 233 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 MRPS6P82932 125 aaKnown RBP15.91■□□□□ 0.14
HDAC4-205ENST00000454542 ZNF174Q15697 407 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 RILPL1Q5EBL4 403 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 NCAPH2Q6IBW4 605 aa15.91■□□□□ 0.14
HDAC4-205ENST00000454542 ANO5Q75V66 913 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms