RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TECP42680 631 aa31.44■■■□□ 2.62
SMARCC1-203ENST00000454240 PSMC5P62195 406 aa31.44■■■□□ 2.62
SMARCC1-203ENST00000454240 PRKCEQ02156 737 aa31.44■■■□□ 2.62
SMARCC1-203ENST00000454240 BFSP2Q13515 415 aa31.44■■■□□ 2.62
SMARCC1-203ENST00000454240 TRIM71Q2Q1W2 868 aaKnown RBP31.44■■■□□ 2.62
SMARCC1-203ENST00000454240 BANK1Q8NDB2 785 aa31.44■■■□□ 2.62
SMARCC1-203ENST00000454240 ZSCAN16Q9H4T2 348 aaPredicted RBP31.44■■■□□ 2.62
SMARCC1-203ENST00000454240 TANC1Q9C0D5 1861 aa31.44■■■□□ 2.62
SMARCC1-203ENST00000454240 ZBTB42B2RXF5 422 aa31.43■■■□□ 2.62
SMARCC1-203ENST00000454240 STBD1O95210 358 aa31.43■■■□□ 2.62
SMARCC1-203ENST00000454240 OATP04181 439 aa31.43■■■□□ 2.62
SMARCC1-203ENST00000454240 QARSP47897 775 aaKnown RBP31.43■■■□□ 2.62
SMARCC1-203ENST00000454240 IGBP1P78318 339 aa31.43■■■□□ 2.62
SMARCC1-203ENST00000454240 ZNF484Q5JVG2 852 aa31.43■■■□□ 2.62
SMARCC1-203ENST00000454240 CCDC155Q8N6L0 562 aa31.43■■■□□ 2.62
SMARCC1-203ENST00000454240 WNT8AQ9H1J5 351 aa31.43■■■□□ 2.62
SMARCC1-203ENST00000454240 NRBP2Q9NSY0 501 aa31.43■■■□□ 2.62
SMARCC1-203ENST00000454240 TUBE1Q9UJT0 475 aa31.43■■■□□ 2.62
SMARCC1-203ENST00000454240 MYH15Q9Y2K3 1946 aa31.43■■■□□ 2.62
SMARCC1-203ENST00000454240 EVPLQ92817 2033 aa31.42■■■□□ 2.62
SMARCC1-203ENST00000454240 POTEMA6NI47 508 aa31.42■■■□□ 2.62
SMARCC1-203ENST00000454240 PRPHP41219 470 aa31.42■■■□□ 2.62
SMARCC1-203ENST00000454240 FXR2P51116 673 aaKnown RBP eCLIP31.42■■■□□ 2.622e-7■■□□□ 12.1
SMARCC1-203ENST00000454240 ATP2C1P98194 919 aaPredicted RBP31.42■■■□□ 2.62
SMARCC1-203ENST00000454240 TRMT1LQ7Z2T5 733 aaKnown RBP31.42■■■□□ 2.62
SMARCC1-203ENST00000454240 TRAPPC12Q8WVT3 735 aa31.42■■■□□ 2.62
SMARCC1-203ENST00000454240 DYDC2Q96IM9 177 aa31.42■■■□□ 2.62
SMARCC1-203ENST00000454240 HSD17B14Q9BPX1 270 aa31.42■■■□□ 2.62
SMARCC1-203ENST00000454240 EIF2AK1Q9BQI3 630 aaKnown RBP31.42■■■□□ 2.62
SMARCC1-203ENST00000454240 PRO3102Q9H379 93 aa31.42■■■□□ 2.62
SMARCC1-203ENST00000454240 RGL1Q9NZL6 768 aa31.42■■■□□ 2.62
SMARCC1-203ENST00000454240 SLITRK3O94933 977 aa31.41■■■□□ 2.62
SMARCC1-203ENST00000454240 CKBP12277 381 aa31.41■■■□□ 2.62
SMARCC1-203ENST00000454240 BMP8BP34820 402 aa31.41■■■□□ 2.62
SMARCC1-203ENST00000454240 CCL23P55773 120 aa31.41■■■□□ 2.62
SMARCC1-203ENST00000454240 XKR3Q5GH77 459 aa31.41■■■□□ 2.62
SMARCC1-203ENST00000454240 TMEM199Q8N511 208 aa31.41■■■□□ 2.62
SMARCC1-203ENST00000454240 RETREG2Q8NC44 543 aa31.41■■■□□ 2.62
SMARCC1-203ENST00000454240 WRAP73Q9P2S5 460 aaPredicted RBP31.41■■■□□ 2.62
SMARCC1-203ENST00000454240 SCN5AQ14524 2016 aa31.41■■■□□ 2.62
SMARCC1-203ENST00000454240 DKC1O60832 514 aaKnown RBP eCLIP31.4■■■□□ 2.62
SMARCC1-203ENST00000454240 TMEM266Q2M3C6 531 aa31.4■■■□□ 2.62
SMARCC1-203ENST00000454240 NEK9Q8TD19 979 aa31.4■■■□□ 2.62
SMARCC1-203ENST00000454240 LXNQ9BS40 222 aa31.4■■■□□ 2.62
SMARCC1-203ENST00000454240 NIFKQ9BYG3 293 aaKnown RBP31.4■■■□□ 2.62
SMARCC1-203ENST00000454240 CEP131Q9UPN4 1083 aa31.4■■■□□ 2.62
SMARCC1-203ENST00000454240 IQCF3P0C7M6 154 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 KLRC1P26715 233 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 FPGSQ05932 587 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 PDIA5Q14554 519 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 IL17AQ16552 155 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 TAF2Q6P1X5 1199 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 FAM173BQ6P4H8 233 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 MTHFD1LQ6UB35 978 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 CHRDL2Q6WN34 429 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 RUFY4Q6ZNE9 571 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 RPAINQ86UA6 219 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 C4orf19Q8IY42 314 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 ZBTB10Q96DT7 871 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 PCDHA2Q9Y5H9 948 aa31.39■■■□□ 2.62
SMARCC1-203ENST00000454240 ZSCAN22P10073 491 aaPredicted RBP31.38■■■□□ 2.61
SMARCC1-203ENST00000454240 CSF2RAP15509 400 aa31.38■■■□□ 2.61
SMARCC1-203ENST00000454240 SELPP16109 830 aa31.38■■■□□ 2.61
SMARCC1-203ENST00000454240 CYP4A11Q02928 519 aa31.38■■■□□ 2.61
SMARCC1-203ENST00000454240 CTTNQ14247 550 aaKnown RBP31.38■■■□□ 2.61
SMARCC1-203ENST00000454240 DTHD1Q6ZMT9 781 aa31.38■■■□□ 2.61
SMARCC1-203ENST00000454240 IGSF22Q8N9C0 903 aa31.38■■■□□ 2.61
SMARCC1-203ENST00000454240 SCLYQ96I15 445 aa31.38■■■□□ 2.61
SMARCC1-203ENST00000454240 ZSWIM4Q9H7M6 989 aa31.38■■■□□ 2.61
SMARCC1-203ENST00000454240 CAND2O75155 1236 aa31.37■■■□□ 2.61
SMARCC1-203ENST00000454240 BMP15O95972 392 aa31.37■■■□□ 2.61
SMARCC1-203ENST00000454240 THPOP40225 353 aa31.37■■■□□ 2.61
SMARCC1-203ENST00000454240 PKP1Q13835 747 aa31.37■■■□□ 2.61
SMARCC1-203ENST00000454240 SF3A1Q15459 793 aaKnown RBP31.37■■■□□ 2.61
SMARCC1-203ENST00000454240 TARBP2Q15633 366 aaKnown RBP31.37■■■□□ 2.61
SMARCC1-203ENST00000454240 ZNF618Q5T7W0 954 aa31.37■■■□□ 2.61
SMARCC1-203ENST00000454240 ARL6IP4Q66PJ3 421 aaKnown RBP31.37■■■□□ 2.61
SMARCC1-203ENST00000454240 TRAF7Q6Q0C0 670 aa31.37■■■□□ 2.61
SMARCC1-203ENST00000454240 ANO5Q75V66 913 aa31.37■■■□□ 2.61
SMARCC1-203ENST00000454240 DDX11L8A8MPP1 907 aa31.36■■■□□ 2.61
SMARCC1-203ENST00000454240 LYPLA2O95372 231 aa31.36■■■□□ 2.61
SMARCC1-203ENST00000454240 PPIGQ13427 754 aaKnown RBP eCLIP31.36■■■□□ 2.612e-7■■□□□ 11.5
SMARCC1-203ENST00000454240 LRRC8DQ7L1W4 858 aa31.36■■■□□ 2.61
SMARCC1-203ENST00000454240 TPH2Q8IWU9 490 aa31.36■■■□□ 2.61
SMARCC1-203ENST00000454240 CEP89Q96ST8 783 aa31.36■■■□□ 2.61
SMARCC1-203ENST00000454240 UBE2OQ9C0C9 1292 aaKnown RBP31.36■■■□□ 2.61
SMARCC1-203ENST00000454240 SEPT9Q9UHD8 586 aaPredicted RBP31.36■■■□□ 2.61
SMARCC1-203ENST00000454240 SMIM35A0A1B0GVV1 85 aa31.35■■■□□ 2.61
SMARCC1-203ENST00000454240 TMEM150BA6NC51 233 aa31.35■■■□□ 2.61
SMARCC1-203ENST00000454240 C22orf31O95567 290 aa31.35■■■□□ 2.61
SMARCC1-203ENST00000454240 SPATA31C1P0DKV0 1188 aa31.35■■■□□ 2.61
SMARCC1-203ENST00000454240 EPHB4P54760 987 aa31.35■■■□□ 2.61
SMARCC1-203ENST00000454240 DNAJB3Q8WWF6 145 aa31.35■■■□□ 2.61
SMARCC1-203ENST00000454240 POLR3CQ9BUI4 534 aaPredicted RBP31.35■■■□□ 2.61
SMARCC1-203ENST00000454240 RAB34Q9BZG1 259 aa31.35■■■□□ 2.61
SMARCC1-203ENST00000454240 LRWD1Q9UFC0 647 aa31.35■■■□□ 2.61
SMARCC1-203ENST00000454240 COLQQ9Y215 455 aaPredicted RBP31.35■■■□□ 2.61
SMARCC1-203ENST00000454240 CLIC4Q9Y696 253 aa31.35■■■□□ 2.61
SMARCC1-203ENST00000454240 ARID2Q68CP9 1835 aa31.34■■■□□ 2.61
SMARCC1-203ENST00000454240 MAGEB2O15479 319 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms