RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 ZNF76P36508 570 aa27.09■■□□□ 1.93
LYSMD2-202ENST00000454181 NECTIN1Q15223 517 aa27.09■■□□□ 1.93
LYSMD2-202ENST00000454181 POTEBQ6S5H4 581 aa27.09■■□□□ 1.93
LYSMD2-202ENST00000454181 CYP2W1Q8TAV3 490 aa27.09■■□□□ 1.93
LYSMD2-202ENST00000454181 P2RX5Q93086 422 aa27.09■■□□□ 1.93
LYSMD2-202ENST00000454181 RIC8AQ9NPQ8 531 aa27.09■■□□□ 1.93
LYSMD2-202ENST00000454181 MRPL42Q9Y6G3 142 aaKnown RBP27.09■■□□□ 1.93
LYSMD2-202ENST00000454181 SCG2P13521 617 aa27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 IBSPP21815 317 aaPredicted RBP27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 SLC26A2P50443 739 aa27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 ADCY7P51828 1080 aa27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 KRT76Q01546 638 aa27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 SMAD2Q15796 467 aaKnown RBP27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 PAN2Q504Q3 1202 aaKnown RBP27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 CEP55Q53EZ4 464 aa27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 WWC2Q6AWC2 1192 aa27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 PPP1R18Q6NYC8 613 aa27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 RTN4RL1Q86UN2 441 aaPredicted RBP27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 TRAPPC12Q8WVT3 735 aa27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 LINC01599Q8WXQ3 324 aa27.08■■□□□ 1.93
LYSMD2-202ENST00000454181 SMIM35A0A1B0GVV1 85 aa27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 C19orf67A6NJJ6 358 aa27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 ARP10275 920 aa27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 NDUFV1P49821 464 aa27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 DLX2Q07687 328 aaPredicted RBP27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 COL9A3Q14050 684 aaPredicted RBP27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 PGBD1Q96JS3 809 aa27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 GLT8D2Q9H1C3 349 aa27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 AGO4Q9HCK5 861 aaKnown RBP27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 CD207Q9UJ71 328 aa27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 GINS2Q9Y248 185 aa27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 IGSF9BQ9UPX0 1349 aa27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 TTC3P53804 2025 aa27.07■■□□□ 1.92
LYSMD2-202ENST00000454181 BACH1O14867 736 aa27.06■■□□□ 1.92
LYSMD2-202ENST00000454181 MBTPS2O43462 519 aa27.06■■□□□ 1.92
LYSMD2-202ENST00000454181 NFX1Q12986 1120 aaKnown RBP27.06■■□□□ 1.92
LYSMD2-202ENST00000454181 SMAD4Q13485 552 aaKnown RBP27.06■■□□□ 1.92
LYSMD2-202ENST00000454181 RTN1Q16799 776 aa27.06■■□□□ 1.92
LYSMD2-202ENST00000454181 FAM160B1Q5W0V3 765 aa27.06■■□□□ 1.92
LYSMD2-202ENST00000454181 MTHFD1LQ6UB35 978 aa27.06■■□□□ 1.92
LYSMD2-202ENST00000454181 ANO3Q9BYT9 981 aa27.06■■□□□ 1.92
LYSMD2-202ENST00000454181 RNF216Q9NWF9 866 aaPredicted RBP27.06■■□□□ 1.92
LYSMD2-202ENST00000454181 V9GY48 417 aaPredicted RBP27.06■■□□□ 1.92
LYSMD2-202ENST00000454181 SMCO2A6NFE2 343 aa27.05■■□□□ 1.92
LYSMD2-202ENST00000454181 ZBTB43O43298 467 aa27.05■■□□□ 1.92
LYSMD2-202ENST00000454181 GTF2F1P35269 517 aaKnown RBP eCLIP27.05■■□□□ 1.92
LYSMD2-202ENST00000454181 IRS1P35568 1242 aa27.05■■□□□ 1.92
LYSMD2-202ENST00000454181 APOA5Q6Q788 366 aa27.05■■□□□ 1.92
LYSMD2-202ENST00000454181 KLHL23Q8NBE8 558 aa27.05■■□□□ 1.92
LYSMD2-202ENST00000454181 NEK1Q96PY6 1258 aa27.05■■□□□ 1.92
LYSMD2-202ENST00000454181 PCDHB7Q9Y5E2 793 aa27.05■■□□□ 1.92
LYSMD2-202ENST00000454181 hCG_1984214I3L0E3 225 aa27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 DDX39AO00148 427 aaKnown RBP27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 HBP1O60381 514 aa27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 ITGB1P05556 798 aa27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 KLRC1P26715 233 aa27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 AP3B2Q13367 1082 aa27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 ADAM15Q13444 863 aa27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 ODR4Q5SWX8 454 aa27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 SPOUT1Q5T280 376 aaKnown RBP27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 FAM43BQ6ZT52 329 aaPredicted RBP27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 ZNF713Q8N859 430 aaPredicted RBP27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 SPPL3Q8TCT6 385 aa27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 CNTNAP5Q8WYK1 1306 aa27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 KDM3AQ9Y4C1 1321 aa27.04■■□□□ 1.92
LYSMD2-202ENST00000454181 STXBP3O00186 592 aa27.03■■□□□ 1.92
LYSMD2-202ENST00000454181 MEIS1O00470 390 aa27.03■■□□□ 1.92
LYSMD2-202ENST00000454181 LINC01565O15544 149 aa27.03■■□□□ 1.92
LYSMD2-202ENST00000454181 TBX10O75333 385 aa27.03■■□□□ 1.92
LYSMD2-202ENST00000454181 ITGB3BPQ13352 177 aaPredicted RBP27.03■■□□□ 1.92
LYSMD2-202ENST00000454181 TMEM266Q2M3C6 531 aa27.03■■□□□ 1.92
LYSMD2-202ENST00000454181 MUC6Q6W4X9 2439 aa27.03■■□□□ 1.92
LYSMD2-202ENST00000454181 POF1BQ8WVV4 589 aa27.03■■□□□ 1.92
LYSMD2-202ENST00000454181 RPS6KA5O75582 802 aa27.02■■□□□ 1.92
LYSMD2-202ENST00000454181 ATG7O95352 703 aa27.02■■□□□ 1.92
LYSMD2-202ENST00000454181 SREBF1P36956 1147 aa27.02■■□□□ 1.92
LYSMD2-202ENST00000454181 CAMK1Q14012 370 aa27.02■■□□□ 1.92
LYSMD2-202ENST00000454181 TYW1BQ6NUM6 668 aa27.02■■□□□ 1.92
LYSMD2-202ENST00000454181 CRIPAKQ8N1N5 446 aa27.02■■□□□ 1.92
LYSMD2-202ENST00000454181 MICAL1Q8TDZ2 1067 aa27.02■■□□□ 1.92
LYSMD2-202ENST00000454181 AAASQ9NRG9 546 aa27.02■■□□□ 1.92
LYSMD2-202ENST00000454181 NAP1L2Q9ULW6 460 aaPredicted RBP27.02■■□□□ 1.92
LYSMD2-202ENST00000454181 PCDHB12Q9Y5F1 795 aa27.02■■□□□ 1.92
LYSMD2-202ENST00000454181 DENND3A2RUS2 1198 aa27.01■■□□□ 1.91
LYSMD2-202ENST00000454181 PPFIA3O75145 1194 aa27.01■■□□□ 1.91
LYSMD2-202ENST00000454181 SARSP49591 514 aaKnown RBP27.01■■□□□ 1.91
LYSMD2-202ENST00000454181 MIS18BP1Q6P0N0 1132 aa27.01■■□□□ 1.91
LYSMD2-202ENST00000454181 PDXDC2PQ6P474 469 aa27.01■■□□□ 1.91
LYSMD2-202ENST00000454181 DHX32Q7L7V1 743 aaKnown RBP27.01■■□□□ 1.91
LYSMD2-202ENST00000454181 NIPA1Q7RTP0 329 aa27.01■■□□□ 1.91
LYSMD2-202ENST00000454181 ATP8B4Q8TF62 1192 aa27.01■■□□□ 1.91
LYSMD2-202ENST00000454181 ZNF302Q9NR11 478 aa27.01■■□□□ 1.91
LYSMD2-202ENST00000454181 TMEM260Q9NX78 707 aa27.01■■□□□ 1.91
LYSMD2-202ENST00000454181 BARHL2Q9NY43 387 aa27.01■■□□□ 1.91
LYSMD2-202ENST00000454181 GOLGA8AA7E2F4 631 aa27■■□□□ 1.91
LYSMD2-202ENST00000454181 GOLGA8BA8MQT2 603 aa27■■□□□ 1.91
LYSMD2-202ENST00000454181 DNAJB1P25685 340 aa27■■□□□ 1.91
LYSMD2-202ENST00000454181 ZNF484Q5JVG2 852 aa27■■□□□ 1.91
LYSMD2-202ENST00000454181 PLA2G4DQ86XP0 818 aa27■■□□□ 1.91
LYSMD2-202ENST00000454181 CKAP2LQ8IYA6 745 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms