RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 TRANK1O15050 2925 aa18.66■□□□□ 0.58
NCKIPSD-208ENST00000454134 GTPBP6O43824 516 aaPredicted RBP18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 ATP4AP20648 1035 aa18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 SLC26A2P50443 739 aa18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 FBXO47Q5MNV8 452 aa18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 TRMT1LQ7Z2T5 733 aaKnown RBP18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 TBCKQ8TEA7 893 aa18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 ATP8B4Q8TF62 1192 aa18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 GDPD5Q8WTR4 605 aa18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 APBB2Q92870 758 aa18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 TOP1MTQ969P6 601 aa18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 SLKQ9H2G2 1235 aaPredicted RBP18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 AGO3Q9H9G7 860 aaKnown RBP18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 COL4A4P53420 1690 aaPredicted RBP18.65■□□□□ 0.58
NCKIPSD-208ENST00000454134 REV3LO60673 3130 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 HBP1O60381 514 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 LPXNO60711 386 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 CENPBP07199 599 aaPredicted RBP18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 POU3F3P20264 500 aaPredicted RBP18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 KLRC1P26715 233 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 ERVK-21P61565 698 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 HTRA4P83105 476 aaPredicted RBP18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 NPY5RQ15761 445 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 ZNF746Q6NUN9 644 aaPredicted RBP18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 MTHFD1LQ6UB35 978 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 CKAP2LQ8IYA6 745 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 BLIDQ8IZY5 108 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 GJA10Q969M2 543 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 TGS1Q96RS0 853 aaKnown RBP18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 YME1L1Q96TA2 773 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 SUGCTQ9HAC7 445 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 THEGQ9P2T0 379 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 TCEAL9Q9UHQ7 104 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 KCNJ14Q9UNX9 436 aa18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 PRRC2BQ5JSZ5 2229 aaKnown RBP18.64■□□□□ 0.57
NCKIPSD-208ENST00000454134 MSH4O15457 936 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 CD52P31358 61 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 USP11P51784 963 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 AK2P54819 239 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 ANAPC15P60006 121 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 KRT76Q01546 638 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 SKIV2LQ15477 1246 aaKnown RBP18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 IER5Q5VY09 327 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 TSHZ1Q6ZSZ6 1077 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 C17orf80Q9BSJ5 609 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 GJB4Q9NTQ9 266 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 GABBR1Q9UBS5 961 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 SAMM50Q9Y512 469 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 TRPV2Q9Y5S1 764 aa18.63■□□□□ 0.57
NCKIPSD-208ENST00000454134 SMIM35A0A1B0GVV1 85 aa18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 ZBTB42B2RXF5 422 aa18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 M0QZ92 97 aa18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 M0R2N6 131 aa18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 PFKFB2O60825 505 aa18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 TDP2O95551 362 aa18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 PSAPP07602 524 aa18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 SMAP1Q8IYB5 467 aaPredicted RBP18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 DAGLBQ8NCG7 672 aa18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 SP7Q8TDD2 431 aaPredicted RBP18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 CELF4Q9BZC1 486 aaKnown RBP18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 PCDHA10Q9Y5I2 948 aa18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 MAFBQ9Y5Q3 323 aaPredicted RBP18.62■□□□□ 0.57
NCKIPSD-208ENST00000454134 ENPP3O14638 875 aa18.61■□□□□ 0.57
NCKIPSD-208ENST00000454134 CHMP2AO43633 222 aa18.61■□□□□ 0.57
NCKIPSD-208ENST00000454134 GAS7O60861 476 aa18.61■□□□□ 0.57
NCKIPSD-208ENST00000454134 CDKL5O76039 1030 aa18.61■□□□□ 0.57
NCKIPSD-208ENST00000454134 SEC24BO95487 1268 aa18.61■□□□□ 0.57
NCKIPSD-208ENST00000454134 RPLP2P05387 115 aaKnown RBP18.61■□□□□ 0.57
NCKIPSD-208ENST00000454134 ZNF484Q5JVG2 852 aa18.61■□□□□ 0.57
NCKIPSD-208ENST00000454134 NECAB1Q8N987 351 aa18.61■□□□□ 0.57
NCKIPSD-208ENST00000454134 SLC5A5Q92911 643 aa18.61■□□□□ 0.57
NCKIPSD-208ENST00000454134 GINS2Q9Y248 185 aa18.61■□□□□ 0.57
NCKIPSD-208ENST00000454134 CUL9Q8IWT3 2517 aa18.61■□□□□ 0.57
NCKIPSD-208ENST00000454134 VCANP13611 3396 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 COL1A2P08123 1366 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 WDR64B1ANS9 1081 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 CTDNEP1O95476 244 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 TJAP1Q5JTD0 557 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 LRCH2Q5VUJ6 765 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 GALNT17Q6IS24 598 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 KIAA0319LQ8IZA0 1049 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 FBXO22Q8NEZ5 403 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 ATXN2LQ8WWM7 1075 aaKnown RBP18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 LINC01599Q8WXQ3 324 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 BBXQ8WY36 941 aaPredicted RBP18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 PPP1R16BQ96T49 567 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 RIT2Q99578 217 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 C22orf23Q9BZE7 217 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 UNC45AQ9H3U1 944 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 CDHR5Q9HBB8 845 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 DISC1Q9NRI5 854 aa18.6■□□□□ 0.57
NCKIPSD-208ENST00000454134 MYH9P35579 1960 aaKnown RBP18.59■□□□□ 0.57
NCKIPSD-208ENST00000454134 LOXHD1Q8IVV2 1947 aa18.59■□□□□ 0.57
NCKIPSD-208ENST00000454134 STK36Q9NRP7 1315 aa18.59■□□□□ 0.57
NCKIPSD-208ENST00000454134 IGSF9BQ9UPX0 1349 aa18.59■□□□□ 0.57
NCKIPSD-208ENST00000454134 ZNF862O60290 1169 aa18.59■□□□□ 0.57
NCKIPSD-208ENST00000454134 LARGE1O95461 756 aa18.59■□□□□ 0.57
NCKIPSD-208ENST00000454134 C22orf31O95567 290 aa18.59■□□□□ 0.57
NCKIPSD-208ENST00000454134 TFF2Q03403 129 aa18.59■□□□□ 0.57
NCKIPSD-208ENST00000454134 NONOQ15233 471 aaKnown RBP eCLIP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms