RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 RGL1Q9NZL6 768 aa16.86■□□□□ 0.29
CCHCR1-208ENST00000451521 COL4A3BPQ9Y5P4 624 aa16.86■□□□□ 0.29
CCHCR1-208ENST00000451521 EPN1Q9Y6I3 576 aaPredicted RBP16.86■□□□□ 0.29
CCHCR1-208ENST00000451521 SLITRK3O94933 977 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 CORO7P57737 925 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 CYP4A11Q02928 519 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 PRKG1Q13976 671 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 CASP8Q14790 479 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 TSR1Q2NL82 804 aaKnown RBP16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 EPM2AIP1Q7L775 607 aaPredicted RBP16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 SAMD3Q8N6K7 520 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 ZNF112Q9UJU3 913 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 NDUFA10O95299 355 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 GNA14O95837 355 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 BCRP11274 1271 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 VSNL1P62760 191 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 UBXN2AP68543 259 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 CDK17Q00537 523 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 EDRF1Q3B7T1 1238 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 MCF2L2Q86YR7 1114 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 BANK1Q8NDB2 785 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 FAM71BQ8TC56 605 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 HOOK2Q96ED9 719 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 MXRA8Q9BRK3 442 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 WDR11Q9BZH6 1224 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 BHMT2Q9H2M3 363 aa16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 MAP3K20Q9NYL2 800 aaKnown RBP16.85■□□□□ 0.29
CCHCR1-208ENST00000451521 TRAF5O00463 557 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 ARP10275 920 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 EPS15P42566 896 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 NBPF12Q5TAG4 269 aaPredicted RBP16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 KRT26Q7Z3Y9 468 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 CCDC102AQ96A19 550 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 COL20A1Q9P218 1284 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 LOXHD1Q8IVV2 1947 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 ANKRD65E5RJM6 399 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 KIF5CO60282 957 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 GAS7O60861 476 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 PHACTR2O75167 634 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 TFRCP02786 760 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 RHOXF2BP0C7M4 288 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 HNRNPH3P31942 346 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 ARHGAP25P42331 645 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 DCAF15Q66K64 600 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 NIPA1Q7RTP0 329 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 DYDC2Q96IM9 177 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 RHOXF2Q9BQY4 288 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 ZNF577Q9BSK1 485 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 PPP1R9AQ9ULJ8 1098 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 REXO2Q9Y3B8 237 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 FRMPD4Q14CM0 1322 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 NFIBO00712 420 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 DDNO94850 711 aaPredicted RBP16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 USP14P54578 494 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 BMT2Q1RMZ1 405 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 HSP90B2PQ58FF3 399 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 RINT1Q6NUQ1 792 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 SFR1Q86XK3 245 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 NELFCDQ8IXH7 590 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 PPM1EQ8WY54 764 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 RIT2Q99578 217 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 RUSC1Q9BVN2 902 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 DEF6Q9H4E7 631 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 PNMA2Q9UL42 364 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 TRAF3IP3Q9Y228 551 aa16.84■□□□□ 0.29
CCHCR1-208ENST00000451521 YBX3P16989 372 aaKnown RBP eCLIP16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 VCAM1P19320 739 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 CASP5P51878 434 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 CTTNQ14247 550 aaKnown RBP16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 EPHA7Q15375 998 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 ANGEL2Q5VTE6 544 aaKnown RBP16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 PCMTD1Q96MG8 357 aaPredicted RBP16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 UNC45AQ9H3U1 944 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 ITGB5P18084 799 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 MTMR2Q13614 643 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 ZNF569Q5MCW4 686 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 SLC30A10Q6XR72 485 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 ZNF662Q6ZS27 426 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 C1orf186Q6ZWK4 172 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 CCDC170Q8IYT3 715 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 SCYL3Q8IZE3 742 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 TEKT3Q9BXF9 490 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 ZNHIT6Q9NWK9 470 aaKnown RBP16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 MYO1AQ9UBC5 1043 aa16.83■□□□□ 0.28
CCHCR1-208ENST00000451521 POLR2AP24928 1970 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 IPO5O00410 1097 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 FDX1P10109 184 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 HOXD13P35453 343 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 KNOP1Q1ED39 458 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 TRIM59Q8IWR1 403 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 TPH2Q8IWU9 490 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 EDEM3Q9BZQ6 932 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 TANGO6Q9C0B7 1094 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 ZHX3Q9H4I2 956 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 FAM204AQ9H8W3 233 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 OLFML3Q9NRN5 406 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 PHIPQ8WWQ0 1821 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 LRRIQ3A6PVS8 624 aaPredicted RBP16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 GAP43P17677 238 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms