RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 PPFIA3O75145 1194 aa30.86■■■□□ 2.53
USP42-204ENST00000451154 RPLP2P05387 115 aaKnown RBP30.86■■■□□ 2.53
USP42-204ENST00000451154 CYP3A4P08684 503 aa30.86■■■□□ 2.53
USP42-204ENST00000451154 COL9A1P20849 921 aa30.86■■■□□ 2.53
USP42-204ENST00000451154 KCNA5P22460 613 aa30.86■■■□□ 2.53
USP42-204ENST00000451154 CRYGNQ8WXF5 182 aa30.86■■■□□ 2.53
USP42-204ENST00000451154 LINC01599Q8WXQ3 324 aa30.86■■■□□ 2.53
USP42-204ENST00000451154 PHKBQ93100 1093 aa30.86■■■□□ 2.53
USP42-204ENST00000451154 CCDC136Q96JN2 1154 aa30.86■■■□□ 2.53
USP42-204ENST00000451154 ZMYND12Q9H0C1 365 aa30.86■■■□□ 2.53
USP42-204ENST00000451154 IGLV3-22A0A075B6J6 115 aa30.85■■■□□ 2.53
USP42-204ENST00000451154 PRPF3O43395 683 aaKnown RBP30.85■■■□□ 2.53
USP42-204ENST00000451154 KLRC1P26715 233 aa30.85■■■□□ 2.53
USP42-204ENST00000451154 CTNNB1P35222 781 aa30.85■■■□□ 2.53
USP42-204ENST00000451154 BANK1Q8NDB2 785 aa30.85■■■□□ 2.53
USP42-204ENST00000451154 CELF4Q9BZC1 486 aaKnown RBP30.85■■■□□ 2.53
USP42-204ENST00000451154 C6orf50Q9HD87 102 aa30.85■■■□□ 2.53
USP42-204ENST00000451154 ESYT2A0FGR8 921 aa30.84■■■□□ 2.53
USP42-204ENST00000451154 LINC00271P0C7V0 271 aa30.84■■■□□ 2.53
USP42-204ENST00000451154 RPS6KB1P23443 525 aa30.84■■■□□ 2.53
USP42-204ENST00000451154 BMPR1AP36894 532 aa30.84■■■□□ 2.53
USP42-204ENST00000451154 SLC26A2P50443 739 aa30.84■■■□□ 2.53
USP42-204ENST00000451154 FAM160B1Q5W0V3 765 aa30.84■■■□□ 2.53
USP42-204ENST00000451154 SWSAP1Q6NVH7 229 aa30.84■■■□□ 2.53
USP42-204ENST00000451154 RC3H2Q9HBD1 1191 aaKnown RBP30.84■■■□□ 2.53
USP42-204ENST00000451154 PADI3Q9ULW8 664 aa30.84■■■□□ 2.53
USP42-204ENST00000451154 SQORQ9Y6N5 450 aa30.84■■■□□ 2.53
USP42-204ENST00000451154 EVPLQ92817 2033 aa30.84■■■□□ 2.53
USP42-204ENST00000451154 COL4A6Q14031 1691 aa30.84■■■□□ 2.53
USP42-204ENST00000451154 RALGAPA2Q2PPJ7 1873 aa30.83■■■□□ 2.53
USP42-204ENST00000451154 SMIM35A0A1B0GVV1 85 aa30.83■■■□□ 2.53
USP42-204ENST00000451154 IPO5O00410 1097 aaKnown RBP30.83■■■□□ 2.53
USP42-204ENST00000451154 LEXMQ3ZCV2 418 aa30.83■■■□□ 2.53
USP42-204ENST00000451154 TCEAL5Q5H9L2 206 aa30.83■■■□□ 2.53
USP42-204ENST00000451154 CCDC60Q8IWA6 550 aaPredicted RBP30.83■■■□□ 2.53
USP42-204ENST00000451154 NME8Q8N427 588 aa30.83■■■□□ 2.53
USP42-204ENST00000451154 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.83■■■□□ 2.53
USP42-204ENST00000451154 ZNF689Q96CS4 500 aaPredicted RBP30.83■■■□□ 2.53
USP42-204ENST00000451154 ZNF302Q9NR11 478 aa30.83■■■□□ 2.53
USP42-204ENST00000451154 ADGRA3Q8IWK6 1321 aa30.82■■■□□ 2.52
USP42-204ENST00000451154 HBP1O60381 514 aa30.82■■■□□ 2.52
USP42-204ENST00000451154 DGKIO75912 1065 aa30.82■■■□□ 2.52
USP42-204ENST00000451154 KRT76Q01546 638 aa30.82■■■□□ 2.52
USP42-204ENST00000451154 BTG3Q14201 252 aaPredicted RBP30.82■■■□□ 2.52
USP42-204ENST00000451154 TIGD5Q53EQ6 642 aa30.82■■■□□ 2.52
USP42-204ENST00000451154 PDXDC2PQ6P474 469 aa30.82■■■□□ 2.52
USP42-204ENST00000451154 REXO1Q8N1G1 1221 aaKnown RBP30.82■■■□□ 2.52
USP42-204ENST00000451154 FBXL16Q8N461 479 aa30.82■■■□□ 2.52
USP42-204ENST00000451154 ATP8B4Q8TF62 1192 aa30.82■■■□□ 2.52
USP42-204ENST00000451154 CCDC12Q8WUD4 166 aaPredicted RBP30.82■■■□□ 2.52
USP42-204ENST00000451154 ZNF577Q9BSK1 485 aa30.82■■■□□ 2.52
USP42-204ENST00000451154 RAPGEFL1Q9UHV5 662 aa30.82■■■□□ 2.52
USP42-204ENST00000451154 IGSF9BQ9UPX0 1349 aa30.81■■■□□ 2.52
USP42-204ENST00000451154 C5orf67F2Z3F1 127 aa30.81■■■□□ 2.52
USP42-204ENST00000451154 RB1P06400 928 aa30.81■■■□□ 2.52
USP42-204ENST00000451154 ATP4AP20648 1035 aa30.81■■■□□ 2.52
USP42-204ENST00000451154 AKAP17AQ02040 695 aaKnown RBP30.81■■■□□ 2.52
USP42-204ENST00000451154 MIS18BP1Q6P0N0 1132 aa30.81■■■□□ 2.52
USP42-204ENST00000451154 RASGRP4Q8TDF6 673 aa30.81■■■□□ 2.52
USP42-204ENST00000451154 FTHL17Q9BXU8 183 aa30.81■■■□□ 2.52
USP42-204ENST00000451154 AGXT2Q9BYV1 514 aa30.81■■■□□ 2.52
USP42-204ENST00000451154 EPHX3Q9H6B9 360 aa30.81■■■□□ 2.52
USP42-204ENST00000451154 MYH9P35579 1960 aaKnown RBP30.8■■■□□ 2.52
USP42-204ENST00000451154 GRM6O15303 877 aa30.8■■■□□ 2.52
USP42-204ENST00000451154 GNA11P29992 359 aa30.8■■■□□ 2.52
USP42-204ENST00000451154 PAK2Q13177 524 aa30.8■■■□□ 2.52
USP42-204ENST00000451154 NTRK3Q16288 839 aa30.8■■■□□ 2.52
USP42-204ENST00000451154 TMEM266Q2M3C6 531 aa30.8■■■□□ 2.52
USP42-204ENST00000451154 MCTP2Q6DN12 878 aa30.8■■■□□ 2.52
USP42-204ENST00000451154 KIAA0319LQ8IZA0 1049 aa30.8■■■□□ 2.52
USP42-204ENST00000451154 CLP1Q92989 425 aaKnown RBP30.8■■■□□ 2.52
USP42-204ENST00000451154 SLC26A6Q9BXS9 759 aa30.8■■■□□ 2.52
USP42-204ENST00000451154 NSUN3Q9H649 340 aaKnown RBP30.8■■■□□ 2.52
USP42-204ENST00000451154 CDHR5Q9HBB8 845 aa30.8■■■□□ 2.52
USP42-204ENST00000451154 GINS2Q9Y248 185 aa30.8■■■□□ 2.52
USP42-204ENST00000451154 NID2Q14112 1375 aa30.79■■■□□ 2.52
USP42-204ENST00000451154 PSMA5P28066 241 aa30.79■■■□□ 2.52
USP42-204ENST00000451154 CCT2P78371 535 aaKnown RBP30.79■■■□□ 2.52
USP42-204ENST00000451154 PRR16Q569H4 304 aa30.79■■■□□ 2.52
USP42-204ENST00000451154 EP400NLQ6ZTU2 488 aa30.79■■■□□ 2.52
USP42-204ENST00000451154 TRMT1LQ7Z2T5 733 aaKnown RBP30.79■■■□□ 2.52
USP42-204ENST00000451154 CRIPAKQ8N1N5 446 aa30.79■■■□□ 2.52
USP42-204ENST00000451154 TMX1Q9H3N1 280 aa30.79■■■□□ 2.52
USP42-204ENST00000451154 NCOA5Q9HCD5 579 aaKnown RBP30.79■■■□□ 2.52
USP42-204ENST00000451154 CD320Q9NPF0 282 aa30.79■■■□□ 2.52
USP42-204ENST00000451154 TBC1D22BQ9NU19 505 aa30.79■■■□□ 2.52
USP42-204ENST00000451154 RWDD3Q9Y3V2 267 aa30.79■■■□□ 2.52
USP42-204ENST00000451154 KDM3AQ9Y4C1 1321 aa30.78■■■□□ 2.52
USP42-204ENST00000451154 H3BQ06 376 aaPredicted RBP30.78■■■□□ 2.52
USP42-204ENST00000451154 REC8O95072 547 aa30.78■■■□□ 2.52
USP42-204ENST00000451154 PDIA3P30101 505 aaKnown RBP30.78■■■□□ 2.52
USP42-204ENST00000451154 NFX1Q12986 1120 aaKnown RBP30.78■■■□□ 2.52
USP42-204ENST00000451154 ZNF484Q5JVG2 852 aa30.78■■■□□ 2.52
USP42-204ENST00000451154 CKAP2LQ8IYA6 745 aa30.78■■■□□ 2.52
USP42-204ENST00000451154 KHSRPQ92945 711 aaKnown RBP eCLIP30.78■■■□□ 2.522e-6■□□□□ 8.4
USP42-204ENST00000451154 C11orf84Q9BUA3 381 aaPredicted RBP30.78■■■□□ 2.52
USP42-204ENST00000451154 ZBTB42B2RXF5 422 aa30.77■■■□□ 2.52
USP42-204ENST00000451154 PTCRAQ6ISU1 281 aaPredicted RBP30.77■■■□□ 2.52
USP42-204ENST00000451154 NPAS4Q8IUM7 802 aa30.77■■■□□ 2.52
USP42-204ENST00000451154 C1QTNF1Q9BXJ1 281 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms