RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 NSUN3Q9H649 340 aaKnown RBP11.65□□□□□ -0.54
LINC01004-202ENST00000450686 EHMT1Q9H9B1 1298 aa11.65□□□□□ -0.54
LINC01004-202ENST00000450686 RC3H2Q9HBD1 1191 aaKnown RBP11.65□□□□□ -0.54
LINC01004-202ENST00000450686 TMEM260Q9NX78 707 aa11.65□□□□□ -0.54
LINC01004-202ENST00000450686 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.54
LINC01004-202ENST00000450686 HCN4Q9Y3Q4 1203 aa11.65□□□□□ -0.54
LINC01004-202ENST00000450686 PCDHA8Q9Y5H6 950 aa11.65□□□□□ -0.54
LINC01004-202ENST00000450686 UBIAD1Q9Y5Z9 338 aa11.65□□□□□ -0.54
LINC01004-202ENST00000450686 PLXNA4Q9HCM2 1894 aa11.65□□□□□ -0.54
LINC01004-202ENST00000450686 EVPLQ92817 2033 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 POTEB3A0JP26 581 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 DDX39AO00148 427 aaKnown RBP11.64□□□□□ -0.55
LINC01004-202ENST00000450686 ADAMTS3O15072 1205 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 GPR37L1O60883 481 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 ARP10275 920 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 INSRRP14616 1297 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 DNAJB1P25685 340 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 MCM5P33992 734 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 MRPS6P82932 125 aaKnown RBP11.64□□□□□ -0.55
LINC01004-202ENST00000450686 TMEM266Q2M3C6 531 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 CREB3L3Q68CJ9 461 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 POTEBQ6S5H4 581 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 SEPT1Q8WYJ6 367 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 APBB2Q92870 758 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 PABPC5Q96DU9 382 aaKnown RBP11.64□□□□□ -0.55
LINC01004-202ENST00000450686 SAMD11Q96NU1 681 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 PPP1R16BQ96T49 567 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 HCSTQ9UBK5 93 aa11.64□□□□□ -0.55
LINC01004-202ENST00000450686 MRPL42Q9Y6G3 142 aaKnown RBP11.64□□□□□ -0.55
LINC01004-202ENST00000450686 CNTNAP5Q8WYK1 1306 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 MBLAC1A4D2B0 266 aaPredicted RBP11.63□□□□□ -0.55
LINC01004-202ENST00000450686 SPDYE3A6NKU9 549 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 TBX10O75333 385 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 IRS1P35568 1242 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 BMPR1AP36894 532 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 ZP2Q05996 745 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 ITGB3BPQ13352 177 aaPredicted RBP11.63□□□□□ -0.55
LINC01004-202ENST00000450686 CAMK1Q14012 370 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 BTG3Q14201 252 aaPredicted RBP11.63□□□□□ -0.55
LINC01004-202ENST00000450686 PLCB4Q15147 1175 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 ADGRD2Q7Z7M1 963 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 ESYT1Q9BSJ8 1104 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 JPH1Q9HDC5 661 aaPredicted RBP11.63□□□□□ -0.55
LINC01004-202ENST00000450686 JADE2Q9NQC1 790 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 ERAP1Q9NZ08 941 aa11.63□□□□□ -0.55
LINC01004-202ENST00000450686 ACTR2P61160 394 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 RBM10P98175 930 aaKnown RBP11.62□□□□□ -0.55
LINC01004-202ENST00000450686 TAF2Q6P1X5 1199 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 XRRA1Q6P2D8 792 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 TSHZ1Q6ZSZ6 1077 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 FANCBQ8NB91 859 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 ZNF689Q96CS4 500 aaPredicted RBP11.62□□□□□ -0.55
LINC01004-202ENST00000450686 MAP3K14Q99558 947 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 LZTS2Q9BRK4 669 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 TMX1Q9H3N1 280 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 SMARCAD1Q9H4L7 1026 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 CDHR5Q9HBB8 845 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 ANO2Q9NQ90 1003 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 KCNH7Q9NS40 1196 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 SLC9A2Q9UBY0 812 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 BRPF3Q9ULD4 1205 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 GINS2Q9Y248 185 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 SLC12A7Q9Y666 1083 aa11.62□□□□□ -0.55
LINC01004-202ENST00000450686 ZNF318Q5VUA4 2279 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 C5orf67F2Z3F1 127 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 MGEA5O60502 916 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 PPFIA3O75145 1194 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 DGKIO75912 1065 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 CCNE2O96020 404 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 ITGB1P05556 798 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 CPA1P15085 419 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 GNAQP50148 359 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 NAPAP54920 295 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 COL19A1Q14993 1142 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 TRMT1LQ7Z2T5 733 aaKnown RBP11.61□□□□□ -0.55
LINC01004-202ENST00000450686 RSPH3Q86UC2 560 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 GIMAP8Q8ND71 665 aaPredicted RBP11.61□□□□□ -0.55
LINC01004-202ENST00000450686 TMEM87BQ96K49 555 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 MXRA8Q9BRK3 442 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 C11orf84Q9BUA3 381 aaPredicted RBP11.61□□□□□ -0.55
LINC01004-202ENST00000450686 ANO3Q9BYT9 981 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 MUTYHQ9UIF7 546 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 PADI3Q9ULW8 664 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 TRPV2Q9Y5S1 764 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 FNDC1Q4ZHG4 1894 aaPredicted RBP11.61□□□□□ -0.55
LINC01004-202ENST00000450686 TECTAO75443 2155 aa11.61□□□□□ -0.55
LINC01004-202ENST00000450686 STXBP3O00186 592 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 MBTPS2O43462 519 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 DCXO43602 365 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
LINC01004-202ENST00000450686 SMARCA1P28370 1054 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 LIFRP42702 1097 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 PAK2Q13177 524 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 NECTIN1Q15223 517 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 APOA5Q6Q788 366 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 RBM23Q86U06 439 aaKnown RBP11.6□□□□□ -0.55
LINC01004-202ENST00000450686 KLHL23Q8NBE8 558 aa11.6□□□□□ -0.55
LINC01004-202ENST00000450686 CLP1Q92989 425 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms