RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 BMP15O95972 392 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 PTDSS1P48651 473 aaKnown RBP9.36□□□□□ -0.91
LSM5-208ENST00000450169 GFPT1Q06210 699 aaPredicted RBP9.36□□□□□ -0.91
LSM5-208ENST00000450169 EHHADHQ08426 723 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 SETDB1Q15047 1291 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 MEI1Q5TIA1 1274 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 SGMS1Q86VZ5 419 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 TBC1D10CQ8IV04 446 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 CSGALNACT2Q8N6G5 542 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 FITM2Q8N6M3 262 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 UTP4Q969X6 686 aaKnown RBP9.36□□□□□ -0.91
LSM5-208ENST00000450169 NUDCD1Q96RS6 583 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 PYM1Q9BRP8 204 aaKnown RBP9.36□□□□□ -0.91
LSM5-208ENST00000450169 YIPF2Q9BWQ6 316 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 MAF1Q9H063 256 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 LY9Q9HBG7 655 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 ETNK1Q9HBU6 452 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 PACSIN2Q9UNF0 486 aaPredicted RBP9.36□□□□□ -0.91
LSM5-208ENST00000450169 LRCH1Q9Y2L9 728 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 GMEB1Q9Y692 573 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 SPEF2Q9C093 1822 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 FAM205CA6NFA0 338 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 B4E1Z4 1266 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 LILRB3O75022 631 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 ZFYP08048 801 aaPredicted RBP9.36□□□□□ -0.91
LSM5-208ENST00000450169 SERPINB4P48594 390 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 INHBCP55103 352 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 TIMM10P62072 90 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 TMEM67Q5HYA8 995 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 TTI2Q6NXR4 508 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 TMC4Q7Z404 712 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 ENDOVQ8N8Q3 282 aaKnown RBP9.36□□□□□ -0.91
LSM5-208ENST00000450169 RBBP8NLQ8NC74 664 aaPredicted RBP9.36□□□□□ -0.91
LSM5-208ENST00000450169 IGDCC4Q8TDY8 1250 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 PTPRN2Q92932 1015 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 EEF2KMTQ96G04 330 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 GBP5Q96PP8 586 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 NOC4LQ9BVI4 516 aaKnown RBP9.36□□□□□ -0.91
LSM5-208ENST00000450169 TIPINQ9BVW5 301 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 PPP1R12CQ9BZL4 782 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 PHACTR1Q9C0D0 580 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 IQCGQ9H095 443 aaKnown RBP9.36□□□□□ -0.91
LSM5-208ENST00000450169 ATP8A2Q9NTI2 1148 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 FAM198AQ9UFP1 575 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 ATP8A1Q9Y2Q0 1164 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 ARL2BPQ9Y2Y0 163 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 C3orf80F5H4A9 247 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 UNC5CO95185 931 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 DEXIO95424 95 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 GJB6O95452 261 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 CD46P15529 392 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 KCNA3P22001 575 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 MTIF2P46199 727 aaKnown RBP9.35□□□□□ -0.91
LSM5-208ENST00000450169 NLRP5P59047 1200 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 FKBP4Q02790 459 aaKnown RBP eCLIP9.35□□□□□ -0.91
LSM5-208ENST00000450169 LMNB2Q03252 620 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 KCNA1Q09470 495 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 TMEM62Q0P6H9 643 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 PARP6Q2NL67 630 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 RABL6Q3YEC7 729 aaPredicted RBP9.35□□□□□ -0.91
LSM5-208ENST00000450169 MIIPQ5JXC2 388 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 SPDYCQ5MJ68 293 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 DNAJC14Q6Y2X3 702 aaPredicted RBP9.35□□□□□ -0.91
LSM5-208ENST00000450169 BICDL1Q6ZP65 573 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 TBC1D16Q8TBP0 767 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 TAF4BQ92750 862 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 AZIN2Q96A70 460 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 CNOT6LQ96LI5 555 aaKnown RBP9.35□□□□□ -0.91
LSM5-208ENST00000450169 DDX23Q9BUQ8 820 aaKnown RBP9.35□□□□□ -0.91
LSM5-208ENST00000450169 FGFR1OP2Q9NVK5 253 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 ABCF2Q9UG63 623 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 PRAMEF22A3QJZ6 481 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 LRRC53A6NM62 1247 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 CCDC169A6NNP5 214 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 CES2O00748 559 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 NVLO15381 856 aaKnown RBP9.35□□□□□ -0.91
LSM5-208ENST00000450169 RGS16O15492 202 aaPredicted RBP9.35□□□□□ -0.91
LSM5-208ENST00000450169 FAM200BP0CF97 657 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 GM2AP17900 193 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 CACNA2D1P54289 1103 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 HLFQ16534 295 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 Q4G0T1 1027 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 FAM114A1Q8IWE2 563 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 ZSCAN29Q8IWY8 852 aaPredicted RBP9.35□□□□□ -0.91
LSM5-208ENST00000450169 ARHGAP18Q8N392 663 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 TTC13Q8NBP0 860 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 SCFD2Q8WU76 684 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 IWS1Q96ST2 819 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 PUS7LQ9H0K6 701 aaKnown RBP9.35□□□□□ -0.91
LSM5-208ENST00000450169 FAM207AQ9NSI2 230 aaPredicted RBP9.35□□□□□ -0.91
LSM5-208ENST00000450169 MYH2Q9UKX2 1941 aa9.35□□□□□ -0.91
LSM5-208ENST00000450169 RBM47A0AV96 593 aaKnown RBP9.34□□□□□ -0.91
LSM5-208ENST00000450169 KCNK3O14649 394 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 EPHB6O15197 1021 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 GPAA1O43292 621 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 NUDT17P0C025 328 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 ITGA6P23229 1130 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 DEUP1Q05D60 604 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 MCL1Q07820 350 aa9.34□□□□□ -0.91
LSM5-208ENST00000450169 MPP3Q13368 585 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms