RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 NKX2-4Q9H2Z4 354 aa15.93■□□□□ 0.14
RTFDC1-204ENST00000449062 TANC1Q9C0D5 1861 aa15.93■□□□□ 0.14
RTFDC1-204ENST00000449062 TRANK1O15050 2925 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 BACH1O14867 736 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 ARHGEF15O94989 841 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 STBD1O95210 358 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 CTSHP09668 335 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 XBP1P17861 261 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 IGBP1P78318 339 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 DEFB103AP81534 67 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 NR5A1Q13285 461 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 FAM160B1Q5W0V3 765 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 MTHFD1LQ6UB35 978 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 KIAA0319LQ8IZA0 1049 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 UNC45AQ9H3U1 944 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 KCNMB3Q9NPA1 279 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 DISC1Q9NRI5 854 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 TRPC6Q9Y210 931 aa15.92■□□□□ 0.14
RTFDC1-204ENST00000449062 TTC28Q96AY4 2481 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 SMIM35A0A1B0GVV1 85 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 FAM205CA6NFA0 338 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 WDR64B1ANS9 1081 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 SLC37A4O43826 429 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 EFCAB14O75071 495 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 PSAPP07602 524 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 KLRC1P26715 233 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 LPIN1Q14693 890 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 ZNF484Q5JVG2 852 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 LRCH2Q5VUJ6 765 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 KRT40Q6A162 431 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 PIK3AP1Q6ZUJ8 805 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 TMCO2Q7Z6W1 182 aaPredicted RBP15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 MYLIPQ8WY64 445 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 HAS1Q92839 578 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 ZSCAN31Q96LW9 406 aaPredicted RBP15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 LLPHQ9BRT6 129 aaKnown RBP15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 GABBR1Q9UBS5 961 aa15.91■□□□□ 0.14
RTFDC1-204ENST00000449062 CCDC194A0A1B0GVG4 234 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 BTBD18B2RXH4 712 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 GAS7O60861 476 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 MMP1P03956 469 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 LETM2Q2VYF4 491 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 FBXO47Q5MNV8 452 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 NEK8Q86SG6 692 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 NME8Q8N427 588 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 BBXQ8WY36 941 aaPredicted RBP15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 SEPT8Q92599 483 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 TEKT3Q9BXF9 490 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 AGO3Q9H9G7 860 aaKnown RBP15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 SLC28A3Q9HAS3 691 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 DDX25Q9UHL0 483 aaKnown RBP15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 SQORQ9Y6N5 450 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 PRUNE2Q8WUY3 3088 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 IGSF9BQ9UPX0 1349 aa15.9■□□□□ 0.14
RTFDC1-204ENST00000449062 COL1A2P08123 1366 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 GJB5O95377 273 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 C22orf31O95567 290 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 RPLP2P05387 115 aaKnown RBP15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 CA3P07451 260 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 GCFC2P16383 781 aaKnown RBP15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 SFNP31947 248 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 KCNJ6P48051 423 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 JAK3P52333 1124 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 MRPS6P82932 125 aaKnown RBP15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 ADGRE1Q14246 886 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 UGCGQ16739 394 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 RSPH3Q86UC2 560 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 CCDC83Q8IWF9 413 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 LINC01465Q8N7H1 131 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 RDM1Q8NG50 284 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 FAM20AQ96MK3 541 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 CEP89Q96ST8 783 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 PRDM12Q9H4Q4 367 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 VAV3Q9UKW4 847 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 CDY2AQ9Y6F7 541 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 KDM3AQ9Y4C1 1321 aa15.89■□□□□ 0.13
RTFDC1-204ENST00000449062 EML1O00423 815 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 WNT7AO00755 349 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 TBX3O15119 743 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 GHRP10912 638 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 KRT2P35908 639 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 TAP1Q03518 808 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 RABEP1Q15276 862 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 TARBP2Q15633 366 aaKnown RBP15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 IER5Q5VY09 327 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 RTN4RL1Q86UN2 441 aaPredicted RBP15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 DIS3L2Q8IYB7 885 aaKnown RBP15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 CRIPAKQ8N1N5 446 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 TOP1MTQ969P6 601 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 RAD9AQ99638 391 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 IFIH1Q9BYX4 1025 aaKnown RBP15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 CELF4Q9BZC1 486 aaKnown RBP15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 FAM49AQ9H0Q0 323 aaPredicted RBP15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 CDHR5Q9HBB8 845 aa15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 SH2B1Q9NRF2 756 aaPredicted RBP15.88■□□□□ 0.13
RTFDC1-204ENST00000449062 LCHNA4D1U4 455 aa15.87■□□□□ 0.13
RTFDC1-204ENST00000449062 KIF28PB7ZC32 967 aa15.87■□□□□ 0.13
RTFDC1-204ENST00000449062 ENPP3O14638 875 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms