RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 CCDC183Q5T5S1 534 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 CAVIN1Q6NZI2 390 aaKnown RBP15.7■□□□□ 0.1
SHMT2-203ENST00000449049 PLPPR4Q7Z2D5 763 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 SH3TC2Q8TF17 1288 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 NUP62CLQ9H1M0 184 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 TNMDQ9H2S6 317 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 AZI2Q9H6S1 392 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 HMX1Q9NP08 348 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-203ENST00000449049 DDX20Q9UHI6 824 aaKnown RBP15.7■□□□□ 0.1
SHMT2-203ENST00000449049 LGALS2P05162 132 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 ATP4AP20648 1035 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 SLC26A2P50443 739 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 PRKCEQ02156 737 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 DGKDQ16760 1214 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 SYAP1Q96A49 352 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-203ENST00000449049 PAGE5Q96GU1 130 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 MTRQ99707 1265 aa15.7■□□□□ 0.1
SHMT2-203ENST00000449049 DBR1Q9UK59 544 aaKnown RBP15.7■□□□□ 0.1
SHMT2-203ENST00000449049 MSCO60682 206 aa15.69■□□□□ 0.1
SHMT2-203ENST00000449049 PLA2G4BP0C869 781 aa15.69■□□□□ 0.1
SHMT2-203ENST00000449049 YWHABP31946 246 aaKnown RBP15.69■□□□□ 0.1
SHMT2-203ENST00000449049 MCM6Q14566 821 aa15.69■□□□□ 0.1
SHMT2-203ENST00000449049 PKN2Q16513 984 aaKnown RBP15.69■□□□□ 0.1
SHMT2-203ENST00000449049 SLC9C1Q4G0N8 1177 aa15.69■□□□□ 0.1
SHMT2-203ENST00000449049 UTP14CQ5TAP6 766 aaKnown RBP15.69■□□□□ 0.1
SHMT2-203ENST00000449049 FBXO46Q6PJ61 603 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-203ENST00000449049 PIGOQ8TEQ8 1089 aa15.69■□□□□ 0.1
SHMT2-203ENST00000449049 CCDC34Q96HJ3 373 aa15.69■□□□□ 0.1
SHMT2-203ENST00000449049 C16orf70Q9BSU1 422 aa15.69■□□□□ 0.1
SHMT2-203ENST00000449049 SMARCAD1Q9H4L7 1026 aa15.69■□□□□ 0.1
SHMT2-203ENST00000449049 ANKEF1Q9NU02 776 aa15.69■□□□□ 0.1
SHMT2-203ENST00000449049 ARID2Q68CP9 1835 aa15.69■□□□□ 0.1
SHMT2-203ENST00000449049 A0A087WWV3 80 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 ZBTB39O15060 712 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 ADAMTS4O75173 837 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 OATP04181 439 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 SLC12A3P55017 1021 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 MDM2Q00987 491 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-203ENST00000449049 FSCN1Q16658 493 aaKnown RBP15.68■□□□□ 0.1
SHMT2-203ENST00000449049 BRDTQ58F21 947 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-203ENST00000449049 XKR3Q5GH77 459 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 SV2BQ7L1I2 683 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 TRIM50Q86XT4 487 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 SYT2Q8N9I0 419 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-203ENST00000449049 GLG1Q92896 1179 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 XPNPEP3Q9NQH7 507 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 IRX5P78411 483 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-203ENST00000449049 CAMK4Q16566 473 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 ANO5Q75V66 913 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 FAM167AQ96KS9 214 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 BHMT2Q9H2M3 363 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 SPC25Q9HBM1 224 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 ERAP1Q9NZ08 941 aa15.68■□□□□ 0.1
SHMT2-203ENST00000449049 HOOK1Q9UJC3 728 aaKnown RBP15.68■□□□□ 0.1
SHMT2-203ENST00000449049 MYH9P35579 1960 aaKnown RBP15.68■□□□□ 0.1
SHMT2-203ENST00000449049 MYADML2A6NDP7 307 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 C6orf222P0C671 652 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-203ENST00000449049 CST5P28325 142 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-203ENST00000449049 AFMP43652 599 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 RARRES1P49788 294 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 POSTNQ15063 836 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 RBM43Q6ZSC3 357 aaKnown RBP15.67■□□□□ 0.1
SHMT2-203ENST00000449049 GRAMD1CQ8IYS0 662 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 NIFKQ9BYG3 293 aaKnown RBP15.67■□□□□ 0.1
SHMT2-203ENST00000449049 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.67■□□□□ 0.14e-7■■□□□ 13.4
SHMT2-203ENST00000449049 PGK1P00558 417 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 MYL1P05976 194 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 ZNF286BP0CG31 522 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 BEX3Q00994 111 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 AMPD3Q01432 767 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 LHX8Q68G74 356 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 OTUD6AQ7L8S5 288 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 KLHDC9Q8NEP7 349 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 ATP8B4Q8TF62 1192 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 BBXQ8WY36 941 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-203ENST00000449049 STAMQ92783 540 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 LRRC27Q9C0I9 530 aa15.67■□□□□ 0.1
SHMT2-203ENST00000449049 ZNF215Q9UL58 517 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-203ENST00000449049 TMEM150BA6NC51 233 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 GTPBP6O43824 516 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-203ENST00000449049 KPNA6O60684 536 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 F2P00734 622 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 PRR29P0C7W0 189 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 CYP11B2P19099 503 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 PNOCQ13519 176 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 PLCB4Q15147 1175 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 PLA2G4FQ68DD2 849 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 CNNM4Q6P4Q7 775 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 CKAP2LQ8IYA6 745 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 PKNOX2Q96KN3 472 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 C7orf25Q9BPX7 421 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 UNC93B1Q9H1C4 597 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 PAK6Q9NQU5 681 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-203ENST00000449049 NRBP2Q9NSY0 501 aa15.66■□□□□ 0.1
SHMT2-203ENST00000449049 SEPT9Q9UHD8 586 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-203ENST00000449049 H3BRB1 525 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 DPYDQ12882 1025 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 DHX8Q14562 1220 aaKnown RBP15.65■□□□□ 0.1
SHMT2-203ENST00000449049 CCSAPQ6IQ19 270 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-203ENST00000449049 TRIM9Q9C026 710 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms