RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SLFN12Q8IYM2 578 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 TDHQ8IZJ6 230 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 SPRYD3Q8NCJ5 442 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 CAGE1Q8TC20 777 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 ATP8B4Q8TF62 1192 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 FAM49AQ9H0Q0 323 aaPredicted RBP13.42□□□□□ -0.26
RFC4-208ENST00000447345 MAFBQ9Y5Q3 323 aaPredicted RBP13.42□□□□□ -0.26
RFC4-208ENST00000447345 ZNF862O60290 1169 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 OATP04181 439 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 OR52Z1P0C646 297 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 IQCF3P0C7M6 154 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 SELPP16109 830 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 TOB1P50616 345 aaPredicted RBP13.41□□□□□ -0.26
RFC4-208ENST00000447345 ADAM17P78536 824 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 PPP2R5CQ13362 524 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 SHHQ15465 462 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 TRIM71Q2Q1W2 868 aaKnown RBP13.41□□□□□ -0.26
RFC4-208ENST00000447345 MARCH8Q5T0T0 291 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 ZNF618Q5T7W0 954 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 B3GNT9Q6UX72 402 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 FERMT3Q86UX7 667 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
RFC4-208ENST00000447345 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■□□□□ 8.5
RFC4-208ENST00000447345 TTC12Q9H892 705 aaPredicted RBP13.41□□□□□ -0.26
RFC4-208ENST00000447345 SEPT9Q9UHD8 586 aaPredicted RBP13.41□□□□□ -0.26
RFC4-208ENST00000447345 PCDHB6Q9Y5E3 794 aa13.41□□□□□ -0.26
RFC4-208ENST00000447345 TMEM150BA6NC51 233 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 POTEMA6NI47 508 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 HBP1O60381 514 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 PDCP20941 246 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 CYP4A11Q02928 519 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 SPIRE1Q08AE8 756 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 HABP4Q5JVS0 413 aaKnown RBP13.4□□□□□ -0.26
RFC4-208ENST00000447345 RDM1Q8NG50 284 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 DNAJB3Q8WWF6 145 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 BBXQ8WY36 941 aaPredicted RBP13.4□□□□□ -0.26
RFC4-208ENST00000447345 RNPC3Q96LT9 517 aaKnown RBP13.4□□□□□ -0.26
RFC4-208ENST00000447345 MTMR9Q96QG7 549 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 SH2D3AQ9BRG2 576 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 IL23AQ9NPF7 189 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 PCDHA12Q9UN75 941 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 COL1A2P08123 1366 aa13.4□□□□□ -0.26
RFC4-208ENST00000447345 RRN3P2A6NIE6 340 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 SYT1P21579 422 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 TRAPPC10P48553 1259 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 RBL2Q08999 1139 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 TMEM62Q0P6H9 643 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 PLA2G4FQ68DD2 849 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 PSRC1Q6PGN9 363 aaPredicted RBP13.39□□□□□ -0.27
RFC4-208ENST00000447345 MTHFD1LQ6UB35 978 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 ZNF365Q70YC5 407 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 C16orf59Q7L2K0 433 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 OTOP2Q7RTS6 562 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 TNPO1Q92973 898 aaKnown RBP13.39□□□□□ -0.27
RFC4-208ENST00000447345 DYDC2Q96IM9 177 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 FAM167AQ96KS9 214 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 LXNQ9BS40 222 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 FTOQ9C0B1 505 aaKnown RBP eCLIP13.39□□□□□ -0.27
RFC4-208ENST00000447345 RGL1Q9NZL6 768 aa13.39□□□□□ -0.27
RFC4-208ENST00000447345 MBLAC1A4D2B0 266 aaPredicted RBP13.38□□□□□ -0.27
RFC4-208ENST00000447345 RSPH10B2B2RC85 870 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 ZBTB42B2RXF5 422 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 RSPH10BP0C881 870 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 KLRC1P26715 233 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 TECP42680 631 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 PSMC5P62195 406 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 ORC2Q13416 577 aaPredicted RBP13.38□□□□□ -0.27
RFC4-208ENST00000447345 CTTNQ14247 550 aaKnown RBP13.38□□□□□ -0.27
RFC4-208ENST00000447345 MBTPS1Q14703 1052 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 MTERF2Q49AM1 385 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 RILPL1Q5EBL4 403 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 ZNF484Q5JVG2 852 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 TMEM240Q5SV17 173 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 TAF2Q6P1X5 1199 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 TRAF7Q6Q0C0 670 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 METTL13Q8N6R0 699 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 PPP1R16BQ96T49 567 aa13.38□□□□□ -0.27
RFC4-208ENST00000447345 WRAP73Q9P2S5 460 aaPredicted RBP13.38□□□□□ -0.27
RFC4-208ENST00000447345 LAMA2P24043 3122 aaKnown RBP13.37□□□□□ -0.27
RFC4-208ENST00000447345 A0A1W2PPC1 479 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 DDX11L8A8MPP1 907 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 ZBBXA8MT70 800 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 NBNO60934 754 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 C22orf31O95567 290 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 RFC2P35250 354 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 QARSP47897 775 aaKnown RBP13.37□□□□□ -0.27
RFC4-208ENST00000447345 PTGDRQ13258 359 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 EPHA7Q15375 998 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 FOXD4L5Q5VV16 416 aaPredicted RBP13.37□□□□□ -0.27
RFC4-208ENST00000447345 RSPH3Q86UC2 560 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 TPH2Q8IWU9 490 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 RPUSD2Q8IZ73 545 aaKnown RBP13.37□□□□□ -0.27
RFC4-208ENST00000447345 FOXD4L4Q8WXT5 416 aaPredicted RBP13.37□□□□□ -0.27
RFC4-208ENST00000447345 VWCEQ96DN2 955 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 EIF2AK1Q9BQI3 630 aaKnown RBP13.37□□□□□ -0.27
RFC4-208ENST00000447345 OSBPL7Q9BZF2 842 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.37□□□□□ -0.27
RFC4-208ENST00000447345 NRBP2Q9NSY0 501 aa13.37□□□□□ -0.27
RFC4-208ENST00000447345 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
RFC4-208ENST00000447345 CEP131Q9UPN4 1083 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms