RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 ACSF2Q96CM8 615 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 GBA2Q9HCG7 927 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 RCAN3Q9UKA8 241 aa9.54□□□□□ -0.88
SMARCE1-206ENST00000447024 UNCXA6NJT0 531 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 IGSF3O75054 1194 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 ZGLP1P0C6A0 271 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 GNA15P30679 374 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 LIG3P49916 1009 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 ATP8B2P98198 1209 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 EGR3Q06889 387 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 PDE4BQ07343 736 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 G3BP1Q13283 466 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 TNFAIP1Q13829 316 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 MAP3K11Q16584 847 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 ITPRIPQ8IWB1 547 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 ZGPATQ8N5A5 531 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 SSH3Q8TE77 659 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 GPR62Q9BZJ7 368 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 MIR1-1HGQ9H1L0 117 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 GPR108Q9NPR9 543 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 GPATCH2Q9NW75 528 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 DDX19BQ9UMR2 479 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 CEP131Q9UPN4 1083 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 PCNTO95613 3336 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 SALL1Q9NSC2 1324 aa9.53□□□□□ -0.88
SMARCE1-206ENST00000447024 CA12O43570 354 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 NOGQ13253 232 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 MVPQ14764 893 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 NBPF9Q3BBW0 867 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 TIGD5Q53EQ6 642 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 LILRA2Q8N149 483 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 PPP1R13LQ8WUF5 828 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 CAPNS2Q96L46 248 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 MXD3Q9BW11 206 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 KRTAP9-3Q9BYQ3 159 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 MCOLN1Q9GZU1 580 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 SIL1Q9H173 461 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 IRF2BPLQ9H1B7 796 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 ADAM30Q9UKF2 790 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 DENND2AQ9ULE3 1009 aa9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 NOP58Q9Y2X3 529 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 WDR33Q9C0J8 1336 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-206ENST00000447024 ARAP2Q8WZ64 1704 aa9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 RLBP1P12271 317 aa9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 CFAP100Q494V2 611 aa9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 HSP90AB4PQ58FF6 505 aa9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 FKBP1CQ5VVH2 108 aa9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 HHIPL2Q6UWX4 724 aa9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 TSPYL5Q86VY4 417 aaPredicted RBP9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 IRF2BP1Q8IU81 584 aa9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 DTWD2Q8NBA8 298 aa9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 CDCA5Q96FF9 252 aa9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 SLC6A17Q9H1V8 727 aa9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 PA2G4Q9UQ80 394 aaKnown RBP9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 ECM29Q5VYK3 1845 aa9.51□□□□□ -0.89
SMARCE1-206ENST00000447024 PAPPA2Q9BXP8 1791 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 PNMA6EA0A0J9YXQ4 647 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 ADM5C9JUS6 153 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 TFE3P19532 575 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 HUNKP57058 714 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 SUPT20HL1Q3ZLR7 823 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 SPTY2D1Q68D10 685 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 ARMC9Q7Z3E5 817 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 ERC1Q8IUD2 1116 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 RPAP2Q8IXW5 612 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 OXR1Q8N573 874 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 TEKT1Q969V4 418 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 ZDHHC15Q96MV8 337 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 ZNF408Q9H9D4 720 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 TNNQ9UQP3 1299 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 IVNS1ABPQ9Y6Y0 642 aa9.5□□□□□ -0.89
SMARCE1-206ENST00000447024 THSD7BQ9C0I4 1608 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 MYH13Q9UKX3 1938 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 A0A1B0GUL7 405 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 FITM1A5D6W6 292 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 HMMRO75330 724 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 UQCRFS1P1P0C7P4 283 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 HSPA1AP0DMV8 641 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 HSPA1BP0DMV9 641 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 HOXA5P20719 270 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 CRKP46108 304 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 TNNI2P48788 182 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 RBM5P52756 815 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 RPL6Q02878 288 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 TFCP2Q12800 502 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 CHAF1AQ13111 956 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 TSNAXIP1Q2TAA8 658 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 RGMBQ6NW40 437 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 TMED8Q6PL24 325 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 CYB5D2Q8WUJ1 264 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 HOOK2Q96ED9 719 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 ZNF512BQ96KM6 892 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 PRMT6Q96LA8 375 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 DEFB129Q9H1M3 183 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 KCNH3Q9ULD8 1083 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 PCDHA11Q9Y5I1 949 aa9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 ASTN2O75129 1339 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-206ENST00000447024 MYOCOSA0A1B0GUC4 107 aa9.48□□□□□ -0.89
SMARCE1-206ENST00000447024 F8W031 263 aaPredicted RBP9.48□□□□□ -0.89
SMARCE1-206ENST00000447024 MAP4K4O95819 1239 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms