RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 TSTA3Q13630 321 aaPredicted RBP19.28■□□□□ 0.68
ATG9A-215ENST00000446716 HHIPL2Q6UWX4 724 aa19.28■□□□□ 0.68
ATG9A-215ENST00000446716 C11orf57Q6ZUT1 292 aaPredicted RBP19.28■□□□□ 0.68
ATG9A-215ENST00000446716 ANKRD42Q8N9B4 389 aa19.28■□□□□ 0.68
ATG9A-215ENST00000446716 SAMSN1Q9NSI8 373 aaKnown RBP19.28■□□□□ 0.68
ATG9A-215ENST00000446716 FLT1P17948 1338 aa19.28■□□□□ 0.68
ATG9A-215ENST00000446716 USP42Q9H9J4 1324 aaKnown RBP19.28■□□□□ 0.68
ATG9A-215ENST00000446716 RPS6KA2Q15349 733 aa19.28■□□□□ 0.68
ATG9A-215ENST00000446716 VSIG1Q86XK7 387 aa19.28■□□□□ 0.68
ATG9A-215ENST00000446716 ZNF280CQ8ND82 737 aa19.28■□□□□ 0.68
ATG9A-215ENST00000446716 LPAR1Q92633 364 aa19.28■□□□□ 0.68
ATG9A-215ENST00000446716 CACYBPQ9HB71 228 aaKnown RBP19.28■□□□□ 0.68
ATG9A-215ENST00000446716 YWHAGP61981 247 aaKnown RBP eCLIP19.27■□□□□ 0.68
ATG9A-215ENST00000446716 PSMC5P62195 406 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 MAGOHBQ96A72 148 aaKnown RBP19.27■□□□□ 0.68
ATG9A-215ENST00000446716 C2orf40Q9H1Z8 148 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 SLC8A2Q9UPR5 921 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 CROCC2H7BZ55 1655 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 PRPSAP2O60256 369 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 KRT1P04264 644 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 RBL2Q08999 1139 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 CEP152O94986 1710 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 A6NNZ2 444 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 SLC16A4O15374 487 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 IGSF3O75054 1194 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 TUBB8Q3ZCM7 444 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 XXYLT1Q8NBI6 393 aa19.27■□□□□ 0.68
ATG9A-215ENST00000446716 DIP2CQ9Y2E4 1556 aa19.27■□□□□ 0.67
ATG9A-215ENST00000446716 WDR46O15213 610 aaKnown RBP19.27■□□□□ 0.67
ATG9A-215ENST00000446716 CCDC62Q6P9F0 684 aa19.27■□□□□ 0.67
ATG9A-215ENST00000446716 URGCPQ8TCY9 931 aa19.27■□□□□ 0.67
ATG9A-215ENST00000446716 OXER1Q8TDS5 423 aa19.27■□□□□ 0.67
ATG9A-215ENST00000446716 SCYL1Q96KG9 808 aa19.27■□□□□ 0.67
ATG9A-215ENST00000446716 PARK7Q99497 189 aaKnown RBP19.27■□□□□ 0.67
ATG9A-215ENST00000446716 TMEM106CQ9BVX2 250 aa19.27■□□□□ 0.67
ATG9A-215ENST00000446716 LRRC7Q96NW7 1537 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 POTEB3A0JP26 581 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 POTECB2RU33 542 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 EIF3CLB5ME19 914 aaKnown RBP19.26■□□□□ 0.67
ATG9A-215ENST00000446716 HUS1O60921 280 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 TXNP10599 105 aaKnown RBP19.26■□□□□ 0.67
ATG9A-215ENST00000446716 ZNF131P52739 623 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 CDC42EP5Q6NZY7 148 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 POTEBQ6S5H4 581 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 EIF3CQ99613 913 aaKnown RBP19.26■□□□□ 0.67
ATG9A-215ENST00000446716 ARHGEF40Q8TER5 1519 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 CAMSAP1Q5T5Y3 1602 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 ACTN1P12814 892 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 HUNKP57058 714 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 GKAP1Q5VSY0 366 aaPredicted RBP19.26■□□□□ 0.67
ATG9A-215ENST00000446716 MICALL1Q8N3F8 863 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 FAM151AQ8WW52 585 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 PKNOX2Q96KN3 472 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 GCOM2Q9BZD3 368 aaPredicted RBP19.26■□□□□ 0.67
ATG9A-215ENST00000446716 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.26■□□□□ 0.67
ATG9A-215ENST00000446716 GDAQ9Y2T3 454 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 IQSEC2Q5JU85 1478 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 CSF1RP07333 972 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 STX2P32856 288 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 PRAMEF18Q5VWM3 479 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 ZNF668Q96K58 619 aaPredicted RBP19.26■□□□□ 0.67
ATG9A-215ENST00000446716 MXD3Q9BW11 206 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 MCF2LO15068 1137 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 ORC2Q13416 577 aaPredicted RBP19.26■□□□□ 0.67
ATG9A-215ENST00000446716 ANKRD20A3Q5VUR7 823 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 PHLDB2Q86SQ0 1253 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 POTEDQ86YR6 584 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 BEST2Q8NFU1 509 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 MGARPQ8TDB4 240 aa19.26■□□□□ 0.67
ATG9A-215ENST00000446716 CDC27P30260 824 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 KCNV1Q6PIU1 500 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 RILPQ96NA2 401 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 MTMR4Q9NYA4 1195 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 TECPR2O15040 1411 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 ZBED6P86452 979 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 ARL13BQ3SXY8 428 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 GSTA1P08263 222 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 GSTA2P09210 222 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 RPS12P25398 132 aaKnown RBP19.25■□□□□ 0.67
ATG9A-215ENST00000446716 CEP57Q86XR8 500 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 CDC42BPBQ9Y5S2 1711 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 SLC4A1P02730 911 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 DYNLT1P63172 113 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 TSPY1Q01534 308 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 ZNF394Q53GI3 561 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 ERICH1Q86X53 443 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 SCN4BQ8IWT1 228 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 DNAAF3Q8N9W5 541 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 ZFYVE28Q9HCC9 887 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 PTPN22Q9Y2R2 807 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 PCDHA10Q9Y5I2 948 aa19.25■□□□□ 0.67
ATG9A-215ENST00000446716 BNIP3LO60238 219 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 CIITAP33076 1130 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 PPFIBP2Q8ND30 876 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 RUNDC3BQ96NL0 473 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 LXNQ9BS40 222 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 ADAMTS13Q76LX8 1427 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 GARSP41250 739 aaKnown RBP19.24■□□□□ 0.67
ATG9A-215ENST00000446716 C1orf228Q6PIY5 440 aa19.24■□□□□ 0.67
ATG9A-215ENST00000446716 PNMA8AQ86V59 439 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms