RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 GUCY1A3Q02108 690 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 PSMD2Q13200 908 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 EPM2AIP1Q7L775 607 aaPredicted RBP20.02■□□□□ 0.8
SHANK3-203ENST00000445220 SESTD1Q86VW0 696 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 CEP19Q96LK0 163 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 KRT1P04264 644 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 ICA1Q05084 483 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 NR5A1Q13285 461 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 MCF2L2Q86YR7 1114 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 PDIK1LQ8N165 341 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 PYROXD1Q8WU10 500 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 GCNT4Q9P109 453 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 ANKFY1Q9P2R3 1169 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 hCG_1984214I3L0E3 225 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 BASP1P80723 227 aaKnown RBP20.02■□□□□ 0.8
SHANK3-203ENST00000445220 ASPRV1Q53RT3 343 aa20.02■□□□□ 0.8
SHANK3-203ENST00000445220 ZNF713Q8N859 430 aaPredicted RBP20.02■□□□□ 0.8
SHANK3-203ENST00000445220 MRPL47Q9HD33 250 aaKnown RBP20.02■□□□□ 0.8
SHANK3-203ENST00000445220 GAP43P17677 238 aa20.02■□□□□ 0.79
SHANK3-203ENST00000445220 ATICP31939 592 aa20.02■□□□□ 0.79
SHANK3-203ENST00000445220 MDH1P40925 334 aaKnown RBP20.02■□□□□ 0.79
SHANK3-203ENST00000445220 CORO7P57737 925 aa20.02■□□□□ 0.79
SHANK3-203ENST00000445220 PTPN12Q05209 780 aaKnown RBP20.02■□□□□ 0.79
SHANK3-203ENST00000445220 TRMT10CQ7L0Y3 403 aaKnown RBP20.02■□□□□ 0.79
SHANK3-203ENST00000445220 ZNF473Q8WTR7 871 aaKnown RBP20.02■□□□□ 0.79
SHANK3-203ENST00000445220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.02■□□□□ 0.79
SHANK3-203ENST00000445220 FAM96AQ9H5X1 160 aa20.02■□□□□ 0.79
SHANK3-203ENST00000445220 BBS9Q3SYG4 887 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 DCAF15Q66K64 600 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 ZNF277Q9NRM2 450 aaPredicted RBP20.01■□□□□ 0.79
SHANK3-203ENST00000445220 CASP2P42575 452 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 KPNA2P52292 529 aaKnown RBP20.01■□□□□ 0.79
SHANK3-203ENST00000445220 TMPRSS15P98073 1019 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 MKRN3Q13064 507 aaKnown RBP20.01■□□□□ 0.79
SHANK3-203ENST00000445220 RAB44Q7Z6P3 723 aaPredicted RBP20.01■□□□□ 0.79
SHANK3-203ENST00000445220 FMR1NBQ8N0W7 255 aaPredicted RBP20.01■□□□□ 0.79
SHANK3-203ENST00000445220 TRIM15Q9C019 465 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 GPHNQ9NQX3 736 aaPredicted RBP20.01■□□□□ 0.79
SHANK3-203ENST00000445220 MIF4GDA9UHW6 222 aaKnown RBP20.01■□□□□ 0.79
SHANK3-203ENST00000445220 LRRN2O75325 713 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 LLGL1Q15334 1064 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 ODR4Q5SWX8 454 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 IL17RAQ96F46 866 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 FAM81BQ96LP2 452 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 WDR24Q96S15 920 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 ARAP3Q8WWN8 1544 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 DIAPH2O60879 1101 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 TEX9Q8N6V9 391 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 TGS1Q96RS0 853 aaKnown RBP20.01■□□□□ 0.79
SHANK3-203ENST00000445220 SPC25Q9HBM1 224 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 PCDHB6Q9Y5E3 794 aa20.01■□□□□ 0.79
SHANK3-203ENST00000445220 SYNGAP1Q96PV0 1343 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 KLC1Q07866 573 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 RGS9BPQ6ZS82 235 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 NUDCD3Q8IVD9 361 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 SIRT2Q8IXJ6 389 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 SRRM1Q8IYB3 904 aaKnown RBP20■□□□□ 0.79
SHANK3-203ENST00000445220 TLK1Q9UKI8 766 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 SLFN13Q68D06 897 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 PCGF5Q86SE9 256 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 NLRP10Q86W26 655 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 DHX40Q8IX18 779 aaKnown RBP20■□□□□ 0.79
SHANK3-203ENST00000445220 DNAJC17Q9NVM6 304 aaKnown RBP20■□□□□ 0.79
SHANK3-203ENST00000445220 SATB2Q9UPW6 733 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 KRT37O76014 449 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 TNNC2P02585 160 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 YARSP54577 528 aaKnown RBP20■□□□□ 0.79
SHANK3-203ENST00000445220 TTC17Q96AE7 1141 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 CCT8L2Q96SF2 557 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 WARS2Q9UGM6 360 aaKnown RBP20■□□□□ 0.79
SHANK3-203ENST00000445220 APOBEC2Q9Y235 224 aaKnown RBP20■□□□□ 0.79
SHANK3-203ENST00000445220 ZDHHC9Q9Y397 364 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 ESYT3A0FGR9 886 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 PFDN6O15212 129 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 CAV1Q03135 178 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 LRRC47Q8N1G4 583 aaKnown RBP20■□□□□ 0.79
SHANK3-203ENST00000445220 MCUQ8NE86 351 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 FAM161BQ96MY7 647 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 TTC1Q99614 292 aa20■□□□□ 0.79
SHANK3-203ENST00000445220 POLR3CQ9BUI4 534 aaPredicted RBP20■□□□□ 0.79
SHANK3-203ENST00000445220 FRMPD2Q68DX3 1309 aaPredicted RBP20■□□□□ 0.79
SHANK3-203ENST00000445220 M0R2C6 588 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 BRAFP15056 766 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 FSCBQ5H9T9 825 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 ICA1LQ8NDH6 482 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 GOLPH3LQ9H4A5 285 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 RPAP1Q9BWH6 1393 aaPredicted RBP19.99■□□□□ 0.79
SHANK3-203ENST00000445220 A6NJR5 290 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 DCLK2Q8N568 766 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 GEMIN8Q9NWZ8 242 aaKnown RBP19.99■□□□□ 0.79
SHANK3-203ENST00000445220 IPO11Q9UI26 975 aaKnown RBP19.99■□□□□ 0.79
SHANK3-203ENST00000445220 G3BP2Q9UN86 482 aaKnown RBP19.99■□□□□ 0.79
SHANK3-203ENST00000445220 TMOD1P28289 359 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 STAT2P52630 851 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 EAPPQ56P03 285 aaPredicted RBP19.99■□□□□ 0.79
SHANK3-203ENST00000445220 HESX1Q9UBX0 185 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 MAP3K4Q9Y6R4 1608 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 DNAJC6O75061 913 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 PLCB4Q15147 1175 aa19.99■□□□□ 0.79
SHANK3-203ENST00000445220 TEKT3Q9BXF9 490 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms