RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 JAK3P52333 1124 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 NR5A1Q13285 461 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 IKBKEQ14164 716 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 ZNF484Q5JVG2 852 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 KRT40Q6A162 431 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 CKAP2LQ8IYA6 745 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 RDM1Q8NG50 284 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 BBXQ8WY36 941 aaPredicted RBP21.04■□□□□ 0.96
CCDC188-202ENST00000444532 TNFRSF25Q93038 417 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 FAM20AQ96MK3 541 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 GABBR1Q9UBS5 961 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 PCDHA2Q9Y5H9 948 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 COL1A2P08123 1366 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 GBF1Q92538 1859 aa21.04■□□□□ 0.96
CCDC188-202ENST00000444532 CCNT1O60563 726 aaKnown RBP21.03■□□□□ 0.96
CCDC188-202ENST00000444532 CTSHP09668 335 aa21.03■□□□□ 0.96
CCDC188-202ENST00000444532 ATP4AP20648 1035 aa21.03■□□□□ 0.96
CCDC188-202ENST00000444532 PBX2P40425 430 aa21.03■□□□□ 0.96
CCDC188-202ENST00000444532 KCNJ6P48051 423 aa21.03■□□□□ 0.96
CCDC188-202ENST00000444532 PLEKHG4Q58EX7 1191 aa21.03■□□□□ 0.96
CCDC188-202ENST00000444532 DNAJB3Q8WWF6 145 aa21.03■□□□□ 0.96
CCDC188-202ENST00000444532 TBC1D32Q96NH3 1257 aa21.03■□□□□ 0.96
CCDC188-202ENST00000444532 TTYH1Q9H313 450 aaPredicted RBP21.03■□□□□ 0.96
CCDC188-202ENST00000444532 UNC45AQ9H3U1 944 aa21.03■□□□□ 0.96
CCDC188-202ENST00000444532 PCDHA11Q9Y5I1 949 aa21.03■□□□□ 0.96
CCDC188-202ENST00000444532 BTBD18B2RXH4 712 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 TBX3O15119 743 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 SLC37A4O43826 429 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 CHRNA1P02708 482 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 EARS2Q5JPH6 523 aaKnown RBP21.02■□□□□ 0.96
CCDC188-202ENST00000444532 MTHFD1LQ6UB35 978 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 B3GNT9Q6UX72 402 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 DIS3L2Q8IYB7 885 aaKnown RBP21.02■□□□□ 0.96
CCDC188-202ENST00000444532 DBF4BQ8NFT6 615 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 TRAPPC12Q8WVT3 735 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 GJA10Q969M2 543 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 FAM167AQ96KS9 214 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 FAM161BQ96MY7 647 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 KCNMB3Q9NPA1 279 aa21.02■□□□□ 0.96
CCDC188-202ENST00000444532 IGSF9BQ9UPX0 1349 aa21.02■□□□□ 0.95
CCDC188-202ENST00000444532 SMIM35A0A1B0GVV1 85 aa21.01■□□□□ 0.95
CCDC188-202ENST00000444532 CHMP2AO43633 222 aa21.01■□□□□ 0.95
CCDC188-202ENST00000444532 KLRC1P26715 233 aa21.01■□□□□ 0.95
CCDC188-202ENST00000444532 WDR5P61964 334 aaKnown RBP21.01■□□□□ 0.95
CCDC188-202ENST00000444532 SAFBQ15424 915 aaKnown RBP eCLIP21.01■□□□□ 0.95
CCDC188-202ENST00000444532 IER5Q5VY09 327 aa21.01■□□□□ 0.95
CCDC188-202ENST00000444532 MIER3Q7Z3K6 550 aa21.01■□□□□ 0.95
CCDC188-202ENST00000444532 NME8Q8N427 588 aa21.01■□□□□ 0.95
CCDC188-202ENST00000444532 SEPT8Q92599 483 aa21.01■□□□□ 0.95
CCDC188-202ENST00000444532 C8orf76Q96K31 380 aa21.01■□□□□ 0.95
CCDC188-202ENST00000444532 ZNF576Q9H609 170 aa21.01■□□□□ 0.95
CCDC188-202ENST00000444532 NRBP2Q9NSY0 501 aa21.01■□□□□ 0.95
CCDC188-202ENST00000444532 FOSBP53539 338 aa21■□□□□ 0.95
CCDC188-202ENST00000444532 RABGGTBP53611 331 aa21■□□□□ 0.95
CCDC188-202ENST00000444532 MGAT3Q09327 533 aa21■□□□□ 0.95
CCDC188-202ENST00000444532 TCTN1Q2MV58 587 aa21■□□□□ 0.95
CCDC188-202ENST00000444532 HERC6Q8IVU3 1022 aa21■□□□□ 0.95
CCDC188-202ENST00000444532 FAM184AQ8NB25 1140 aa21■□□□□ 0.95
CCDC188-202ENST00000444532 APBB2Q92870 758 aa21■□□□□ 0.95
CCDC188-202ENST00000444532 ZBTB10Q96DT7 871 aa21■□□□□ 0.95
CCDC188-202ENST00000444532 GUCD1Q96NT3 240 aa21■□□□□ 0.95
CCDC188-202ENST00000444532 FAM49AQ9H0Q0 323 aaPredicted RBP21■□□□□ 0.95
CCDC188-202ENST00000444532 CEP131Q9UPN4 1083 aa21■□□□□ 0.95
CCDC188-202ENST00000444532 STXBP5LQ9Y2K9 1186 aa21■□□□□ 0.95
CCDC188-202ENST00000444532 FAM205CA6NFA0 338 aa20.99■□□□□ 0.95
CCDC188-202ENST00000444532 ZBTB42B2RXF5 422 aa20.99■□□□□ 0.95
CCDC188-202ENST00000444532 KIF28PB7ZC32 967 aa20.99■□□□□ 0.95
CCDC188-202ENST00000444532 BAG4O95429 457 aaKnown RBP20.99■□□□□ 0.95
CCDC188-202ENST00000444532 MCM2P49736 904 aa20.99■□□□□ 0.95
CCDC188-202ENST00000444532 MRPS6P82932 125 aaKnown RBP20.99■□□□□ 0.95
CCDC188-202ENST00000444532 PPP2R5CQ13362 524 aa20.99■□□□□ 0.95
CCDC188-202ENST00000444532 SLC28A3Q9HAS3 691 aa20.99■□□□□ 0.95
CCDC188-202ENST00000444532 YBX2Q9Y2T7 364 aaKnown RBP20.99■□□□□ 0.95
CCDC188-202ENST00000444532 CDY2AQ9Y6F7 541 aa20.99■□□□□ 0.95
CCDC188-202ENST00000444532 SQORQ9Y6N5 450 aa20.99■□□□□ 0.95
CCDC188-202ENST00000444532 SIP14410 1827 aa20.99■□□□□ 0.95
CCDC188-202ENST00000444532 PTPRSQ13332 1948 aa20.98■□□□□ 0.95
CCDC188-202ENST00000444532 M0QZ92 97 aa20.98■□□□□ 0.95
CCDC188-202ENST00000444532 ZNF862O60290 1169 aa20.98■□□□□ 0.95
CCDC188-202ENST00000444532 MARCH6O60337 910 aa20.98■□□□□ 0.95
CCDC188-202ENST00000444532 OATP04181 439 aa20.98■□□□□ 0.95
CCDC188-202ENST00000444532 SLFN12Q8IYM2 578 aa20.98■□□□□ 0.95
CCDC188-202ENST00000444532 FBXO18Q8NFZ0 1043 aa20.98■□□□□ 0.95
CCDC188-202ENST00000444532 HAS1Q92839 578 aa20.98■□□□□ 0.95
CCDC188-202ENST00000444532 CDX2Q99626 313 aaPredicted RBP20.98■□□□□ 0.95
CCDC188-202ENST00000444532 IFIH1Q9BYX4 1025 aaKnown RBP20.98■□□□□ 0.95
CCDC188-202ENST00000444532 OSBPL7Q9BZF2 842 aa20.98■□□□□ 0.95
CCDC188-202ENST00000444532 NKX2-4Q9H2Z4 354 aa20.98■□□□□ 0.95
CCDC188-202ENST00000444532 MICAL3Q7RTP6 2002 aa20.98■□□□□ 0.95
CCDC188-202ENST00000444532 EVPLQ92817 2033 aa20.97■□□□□ 0.95
CCDC188-202ENST00000444532 MAGEB2O15479 319 aa20.97■□□□□ 0.95
CCDC188-202ENST00000444532 GUCY1B3Q02153 619 aa20.97■□□□□ 0.95
CCDC188-202ENST00000444532 PRKCEQ02156 737 aa20.97■□□□□ 0.95
CCDC188-202ENST00000444532 MKRN4PQ13434 485 aaPredicted RBP20.97■□□□□ 0.95
CCDC188-202ENST00000444532 TRMT1LQ7Z2T5 733 aaKnown RBP20.97■□□□□ 0.95
CCDC188-202ENST00000444532 POTEDQ86YR6 584 aa20.97■□□□□ 0.95
CCDC188-202ENST00000444532 USP38Q8NB14 1042 aa20.97■□□□□ 0.95
CCDC188-202ENST00000444532 BACH2Q9BYV9 841 aa20.97■□□□□ 0.95
CCDC188-202ENST00000444532 FOXP1Q9H334 677 aaPredicted RBP20.97■□□□□ 0.95
CCDC188-202ENST00000444532 VAV3Q9UKW4 847 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms